RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 TEX11Q8IYF3 940 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 GPRC5AQ8NFJ5 357 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 PAGR1Q9BTK6 254 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 RAI14Q9P0K7 980 aa20.1■□□□□ 0.81
CDC42EP1-202ENST00000415670 ATN1P54259 1190 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP1-202ENST00000415670 BACE1P56817 501 aa20.09■□□□□ 0.81
CDC42EP1-202ENST00000415670 GPATCH3Q96I76 525 aa20.09■□□□□ 0.81
CDC42EP1-202ENST00000415670 WDR18Q9BV38 432 aa20.09■□□□□ 0.81
CDC42EP1-202ENST00000415670 SENP6Q9GZR1 1112 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP1-202ENST00000415670 EMILIN3Q9NT22 766 aa20.09■□□□□ 0.81
CDC42EP1-202ENST00000415670 TTC41PQ6P2S7 1318 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 CNMDO75829 334 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 ZKSCAN1P17029 563 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 HOXA7P31268 230 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 PDE1AP54750 535 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 PABPC4Q13310 644 aaKnown RBP eCLIP20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 GPR142Q7Z601 462 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 ADGRA1Q86SQ6 560 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 MAPKAPK5Q8IW41 473 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 SPATA5Q8NB90 893 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 OSBPL3Q9H4L5 887 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 SNRKQ9NRH2 765 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 ECHDC1Q9NTX5 307 aa20.08■□□□□ 0.81
CDC42EP1-202ENST00000415670 FRMPD3Q5JV73 1810 aa20.08■□□□□ 0.8
CDC42EP1-202ENST00000415670 MYO5AQ9Y4I1 1855 aaKnown RBP20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 PDS5AQ29RF7 1337 aaKnown RBP20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 CDH23Q9H251 3354 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 ZBTB22O15209 634 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 ERVK-9P63128 1117 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 ERVK-24P63145 666 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 GORABQ5T7V8 394 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 SAP30BPQ9UHR5 308 aaKnown RBP20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 PALD1Q9ULE6 856 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 CDK5RAP2Q96SN8 1893 aa20.07■□□□□ 0.8
CDC42EP1-202ENST00000415670 MCAMP43121 646 aa20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 ZYXQ15942 572 aaKnown RBP20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 CCDC158Q5M9N0 1113 aa20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 TRPV1Q8NER1 839 aa20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 TGFBRAP1Q8WUH2 860 aa20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 AATFQ9NY61 560 aaKnown RBP eCLIP20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 TMOD4Q9NZQ9 345 aa20.06■□□□□ 0.8
CDC42EP1-202ENST00000415670 C9orf50Q5SZB4 431 aa20.05■□□□□ 0.8
CDC42EP1-202ENST00000415670 PLEKHH3Q7Z736 793 aa20.05■□□□□ 0.8
CDC42EP1-202ENST00000415670 AS3MTQ9HBK9 375 aa20.05■□□□□ 0.8
CDC42EP1-202ENST00000415670 PI4KBQ9UBF8 816 aa20.05■□□□□ 0.8
CDC42EP1-202ENST00000415670 COL2A1P02458 1487 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP1-202ENST00000415670 ERC2O15083 957 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 UQCRFS1P1P0C7P4 283 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 ATP5JP18859 108 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 SHHQ15465 462 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 TTC39AQ5SRH9 613 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 ANO1Q5XXA6 986 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 NPLOC4Q8TAT6 608 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 PI4K2BQ8TCG2 481 aa20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 CDX2Q99626 313 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP1-202ENST00000415670 USP17L10C9JJH3 530 aa20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 GLRX3O76003 335 aaKnown RBP20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 LDHCP07864 332 aa20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 ARID4AP29374 1257 aaPredicted RBP20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 MAPK4P31152 587 aa20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 RGS2P41220 211 aa20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 DYNLL1P63167 89 aaKnown RBP20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 SOCS4Q8WXH5 440 aa20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 HERC5Q9UII4 1024 aaKnown RBP20.03■□□□□ 0.8
CDC42EP1-202ENST00000415670 CNGA1P29973 690 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 CYP2C19P33261 490 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 GSTO1P78417 241 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 MAP2K5Q13163 448 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 GJC2Q5T442 439 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 FAM109BQ6ICB4 259 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 TBC1D2Q9BYX2 928 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 LRP2BPQ9P2M1 347 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 ZBTB21Q9ULJ3 1066 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 MAST2Q6P0Q8 1798 aa20.02■□□□□ 0.8
CDC42EP1-202ENST00000415670 ASNSP08243 561 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 TTC22Q5TAA0 569 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 WDR78Q5VTH9 848 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 METTL16Q86W50 562 aaKnown RBP20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 EDC3Q96F86 508 aaKnown RBP20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 APBA2Q99767 749 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 TTYH1Q9H313 450 aaPredicted RBP20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 SEMA6BQ9H3T3 888 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 BTBD7Q9P203 1132 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 LTBP2Q14767 1821 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 FLT1P17948 1338 aa20.01■□□□□ 0.79
CDC42EP1-202ENST00000415670 MYH7P12883 1935 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 C19orf81C9J6K1 198 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 GH2P01242 217 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 RTP1P59025 263 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 SH3RF1Q7Z6J0 888 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 CCAR1Q8IX12 1150 aaKnown RBP20■□□□□ 0.79
CDC42EP1-202ENST00000415670 ACER1Q8TDN7 264 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 MYLIPQ8WY64 445 aa20■□□□□ 0.79
CDC42EP1-202ENST00000415670 LBHD1Q9BQE6 289 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms