RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 GOLGA8BA8MQT2 603 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 TRAK2O60296 914 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 TPM2P07951 284 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 POTEIP0CG38 1075 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 POTEJP0CG39 1038 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 CERKLQ49MI3 558 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 EAPPQ56P03 285 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 IFIT1BQ5T764 474 aaKnown RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 ZNF274Q96GC6 653 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 MTA3Q9BTC8 594 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 STX8Q9UNK0 236 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 USP50Q70EL3 339 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 MICU3Q86XE3 530 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
SHMT2-202ENST00000414700 GZF1Q9H116 711 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-202ENST00000414700 IQCA1LA6NCM1 817 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 CCDC69A6NI79 296 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 PFKFB2O60825 505 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 PPFIA3O75145 1194 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 GRPEL1Q9HAV7 217 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 TCP11L1Q9NUJ3 509 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 SLC12A7Q9Y666 1083 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 PITPNM2Q9BZ72 1349 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 PLIN4Q96Q06 1357 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 MYH4Q9Y623 1939 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
SHMT2-202ENST00000414700 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.15■□□□□ 0.5
SHMT2-202ENST00000414700 SSC5DA1L4H1 1573 aa18.14■□□□□ 0.49
SHMT2-202ENST00000414700 IGKV6D-41A0A0C4DH26 115 aa18.14■□□□□ 0.49
SHMT2-202ENST00000414700 TBC1D12O60347 775 aa18.14■□□□□ 0.49
SHMT2-202ENST00000414700 MAP3K10Q02779 954 aa18.14■□□□□ 0.49
SHMT2-202ENST00000414700 ZNF654Q8IZM8 581 aa18.14■□□□□ 0.49
SHMT2-202ENST00000414700 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SHMT2-202ENST00000414700 DCPSQ96C86 337 aaKnown RBP18.14■□□□□ 0.49
SHMT2-202ENST00000414700 CHMP4CQ96CF2 233 aa18.14■□□□□ 0.49
SHMT2-202ENST00000414700 DDX11L8A8MPP1 907 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 GUCY1A2P33402 732 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 RASGRP2Q7LDG7 609 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 DGKHQ86XP1 1220 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 CCDC17Q96LX7 622 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 MTMR4Q9NYA4 1195 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 ZBTB43O43298 467 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 GH2P01242 217 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 CDC27P30260 824 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 NT5C2P49902 561 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 SEPT2Q15019 361 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 ABCB5Q2M3G0 1257 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 TMEM47Q9BQJ4 181 aa18.13■□□□□ 0.49
SHMT2-202ENST00000414700 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
SHMT2-202ENST00000414700 ATAD5Q96QE3 1844 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 PHF20L1A8MW92 1017 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
SHMT2-202ENST00000414700 TROAPQ12815 778 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 KRT26Q7Z3Y9 468 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 SULF1Q8IWU6 871 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 NUP133Q8WUM0 1156 aa18.12■□□□□ 0.49
SHMT2-202ENST00000414700 FAM217BQ9NTX9 383 aaPredicted RBP18.12■□□□□ 0.49
SHMT2-202ENST00000414700 JAK2O60674 1132 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 NOVP48745 357 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 METAP2P50579 478 aaKnown RBP eCLIP18.11■□□□□ 0.491e-6■■■□□ 16.1
SHMT2-202ENST00000414700 PNMA1Q8ND90 353 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 ANKS1AQ92625 1134 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
SHMT2-202ENST00000414700 NMRK2Q9NPI5 230 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 MTMR7Q9Y216 660 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 RAB3GAP1Q15042 981 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 SIAH1Q8IUQ4 282 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 ZC3H15Q8WU90 426 aaKnown RBP18.11■□□□□ 0.49
SHMT2-202ENST00000414700 TAOK2Q9UL54 1235 aa18.11■□□□□ 0.49
SHMT2-202ENST00000414700 GOLGA8AA7E2F4 631 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 CCDC84Q86UT8 332 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-202ENST00000414700 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 PNMA8AQ86V59 439 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-202ENST00000414700 CMTR1Q8N1G2 835 aaKnown RBP18.1■□□□□ 0.49
SHMT2-202ENST00000414700 LRRC47Q8N1G4 583 aaKnown RBP18.1■□□□□ 0.49
SHMT2-202ENST00000414700 GLIS2Q9BZE0 524 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-202ENST00000414700 KAT14Q9H8E8 782 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 CLIP2Q9UDT6 1046 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 PPP2R3BQ9Y5P8 575 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 DDIT3P35638 169 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 CAP2P40123 477 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 ATP2B2Q01814 1243 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 PRKG1Q13976 671 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 TMEM179Q6ZVK1 233 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 CATIPQ7Z7H3 387 aa18.1■□□□□ 0.49
SHMT2-202ENST00000414700 TTLL1O95922 423 aa18.09■□□□□ 0.49
SHMT2-202ENST00000414700 EEF2P13639 858 aaKnown RBP18.09■□□□□ 0.49
SHMT2-202ENST00000414700 VEGFAP15692 232 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-202ENST00000414700 INPP5BP32019 993 aa18.09■□□□□ 0.49
SHMT2-202ENST00000414700 SYNE3Q6ZMZ3 975 aa18.09■□□□□ 0.49
SHMT2-202ENST00000414700 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
SHMT2-202ENST00000414700 NSUN7Q8NE18 718 aaKnown RBP18.09■□□□□ 0.49
SHMT2-202ENST00000414700 PDCL3Q9H2J4 239 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms