RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
SF1-207ENST00000413951 ANTXR1Q9H6X2 564 aa20.19■□□□□ 0.82
SF1-207ENST00000413951 EMILIN3Q9NT22 766 aa20.19■□□□□ 0.82
SF1-207ENST00000413951 FOCADQ5VW36 1801 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 A0A1W2PPC1 479 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 NEFLP07196 543 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 CYP2B6P20813 491 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 RGS2P41220 211 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 JAG1P78504 1218 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 RAB3GAP1Q15042 981 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 SLC9C2Q5TAH2 1124 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 SMC5Q8IY18 1101 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 KIAA1683Q9H0B3 1180 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 RBPJLQ9UBG7 517 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 RABGAP1Q9Y3P9 1069 aa20.18■□□□□ 0.82
SF1-207ENST00000413951 IGHDP01880 384 aa20.17■□□□□ 0.82
SF1-207ENST00000413951 ZKSCAN1P17029 563 aaPredicted RBP20.17■□□□□ 0.82
SF1-207ENST00000413951 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
SF1-207ENST00000413951 RIOK1Q9BRS2 568 aaKnown RBP20.17■□□□□ 0.82
SF1-207ENST00000413951 LRRCC1Q9C099 1032 aa20.17■□□□□ 0.82
SF1-207ENST00000413951 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
SF1-207ENST00000413951 SIPA1L1O43166 1804 aa20.16■□□□□ 0.82
SF1-207ENST00000413951 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
SF1-207ENST00000413951 PAGR1Q9BTK6 254 aa20.16■□□□□ 0.82
SF1-207ENST00000413951 TXNRD2Q9NNW7 524 aa20.16■□□□□ 0.82
SF1-207ENST00000413951 PDE6AP16499 860 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 ERICH6BQ5W0A0 696 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 CATSPERGQ6ZRH7 1159 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 GPR142Q7Z601 462 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 AMOTL1Q8IY63 956 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 TRIB2Q92519 343 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.82
SF1-207ENST00000413951 MCM9Q9NXL9 1143 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 RBM27Q9P2N5 1060 aaKnown RBP20.15■□□□□ 0.82
SF1-207ENST00000413951 NDUFB9Q9Y6M9 179 aa20.15■□□□□ 0.82
SF1-207ENST00000413951 PRKAR2AP13861 404 aaKnown RBP20.14■□□□□ 0.81
SF1-207ENST00000413951 MAP3K21Q5TCX8 1036 aa20.14■□□□□ 0.81
SF1-207ENST00000413951 LBX2Q6XYB7 198 aa20.14■□□□□ 0.81
SF1-207ENST00000413951 DNAJC2Q99543 621 aaKnown RBP20.14■□□□□ 0.81
SF1-207ENST00000413951 APBA2Q99767 749 aa20.14■□□□□ 0.81
SF1-207ENST00000413951 SWAP70Q9UH65 585 aa20.14■□□□□ 0.81
SF1-207ENST00000413951 CDK5RAP2Q96SN8 1893 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 ZNF532Q9HCE3 1301 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 APBB1O00213 710 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 GOLIM4O00461 696 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 PLCD1P51178 756 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 ZYXQ15942 572 aaKnown RBP20.13■□□□□ 0.81
SF1-207ENST00000413951 SHROOM1Q2M3G4 852 aaPredicted RBP20.13■□□□□ 0.81
SF1-207ENST00000413951 Q3C1V9 767 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 DDRGK1Q96HY6 314 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 OGDHLQ9ULD0 1010 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 IVNS1ABPQ9Y6Y0 642 aa20.13■□□□□ 0.81
SF1-207ENST00000413951 VCAM1P19320 739 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 SHMT1P34896 483 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 GABPAQ06546 454 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 MORN1Q5T089 497 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 USP6NLQ92738 828 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
SF1-207ENST00000413951 C11orf49Q9H6J7 331 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 SH2D4AQ9H788 454 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 HOXC10Q9NYD6 342 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 MYH1P12882 1939 aa20.12■□□□□ 0.81
SF1-207ENST00000413951 SLC15A5A6NIM6 579 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 MPHOSPH10O00566 681 aaKnown RBP20.11■□□□□ 0.81
SF1-207ENST00000413951 SMARCA5O60264 1052 aaPredicted RBP20.11■□□□□ 0.81
SF1-207ENST00000413951 MAP2K5Q13163 448 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 MFSD14CQ5VZR4 134 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 ZSCAN25Q6NSZ9 544 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 TMEM179Q6ZVK1 233 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 PORCNQ9H237 461 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 PRO3102Q9H379 93 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 PAG1Q9NWQ8 432 aa20.11■□□□□ 0.81
SF1-207ENST00000413951 DOCK3Q8IZD9 2030 aa20.1■□□□□ 0.81
SF1-207ENST00000413951 ATP5JP18859 108 aa20.1■□□□□ 0.81
SF1-207ENST00000413951 TRIM32Q13049 653 aa20.1■□□□□ 0.81
SF1-207ENST00000413951 WDR78Q5VTH9 848 aa20.1■□□□□ 0.81
SF1-207ENST00000413951 RPAP3Q9H6T3 665 aaPredicted RBP20.1■□□□□ 0.81
SF1-207ENST00000413951 DCP1AQ9NPI6 582 aaPredicted RBP20.1■□□□□ 0.81
SF1-207ENST00000413951 CEP290O15078 2479 aa20.1■□□□□ 0.81
SF1-207ENST00000413951 MYO5AQ9Y4I1 1855 aaKnown RBP20.09■□□□□ 0.81
SF1-207ENST00000413951 MSCO60682 206 aa20.09■□□□□ 0.81
SF1-207ENST00000413951 CACNB2Q08289 660 aaPredicted RBP20.09■□□□□ 0.81
SF1-207ENST00000413951 COG2Q14746 738 aa20.09■□□□□ 0.81
SF1-207ENST00000413951 ACER1Q8TDN7 264 aa20.09■□□□□ 0.81
SF1-207ENST00000413951 LPAR1Q92633 364 aa20.09■□□□□ 0.81
SF1-207ENST00000413951 CCDC17Q96LX7 622 aa20.09■□□□□ 0.81
SF1-207ENST00000413951 ARHGEF10LQ9HCE6 1279 aa20.09■□□□□ 0.81
SF1-207ENST00000413951 TCRBV5S4A2TA0A5A2 114 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 STRNO43815 780 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 PTPREP23469 700 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 NUCB1Q02818 461 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 SEPT2Q15019 361 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 MB21D1Q8N884 522 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 DIS3LQ8TF46 1054 aaKnown RBP20.08■□□□□ 0.81
SF1-207ENST00000413951 SLC5A4Q9NY91 659 aa20.08■□□□□ 0.81
SF1-207ENST00000413951 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
SF1-207ENST00000413951 HOXC6P09630 235 aa20.07■□□□□ 0.8
SF1-207ENST00000413951 BMP8BP34820 402 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms