RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 ANKRD13CQ8N6S4 541 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 ACER1Q8TDN7 264 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 TRIM47Q96LD4 638 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 FEZ1Q99689 392 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
LIMS4-201ENST00000413601 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
LIMS4-201ENST00000413601 MINDY4BA8MYZ0 360 aa17.74■□□□□ 0.43
LIMS4-201ENST00000413601 PATL2C9JE40 543 aaKnown RBP17.74■□□□□ 0.43
LIMS4-201ENST00000413601 FMNL1O95466 1100 aaPredicted RBP17.74■□□□□ 0.43
LIMS4-201ENST00000413601 AKR1B1P15121 316 aa17.74■□□□□ 0.43
LIMS4-201ENST00000413601 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
LIMS4-201ENST00000413601 STK11IPQ8N1F8 1099 aa17.74■□□□□ 0.43
LIMS4-201ENST00000413601 PTCH2Q9Y6C5 1203 aa17.74■□□□□ 0.43
LIMS4-201ENST00000413601 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
LIMS4-201ENST00000413601 MYH4Q9Y623 1939 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 TRIM6-TRIM34B2RNG4 842 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 GNRH1P01148 92 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 TDO2P48775 406 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 SOX10P56693 466 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 IRX3P78415 501 aaPredicted RBP17.73■□□□□ 0.43
LIMS4-201ENST00000413601 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 TMEM179Q6ZVK1 233 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 IFNL3Q8IZI9 196 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
LIMS4-201ENST00000413601 A0A1W2PRG0 241 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 GCLCP48506 637 aaPredicted RBP17.72■□□□□ 0.43
LIMS4-201ENST00000413601 USP14P54578 494 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 FCGRTP55899 365 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 RILPL2Q969X0 211 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 C12orf42Q96LP6 360 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 CCDC17Q96LX7 622 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 P2RX7Q99572 595 aaKnown RBP17.72■□□□□ 0.43
LIMS4-201ENST00000413601 OSBPL3Q9H4L5 887 aa17.72■□□□□ 0.43
LIMS4-201ENST00000413601 PARP14Q460N5 1801 aa17.71■□□□□ 0.43
LIMS4-201ENST00000413601 FAM110CQ1W6H9 321 aa17.71■□□□□ 0.43
LIMS4-201ENST00000413601 FAM227BQ96M60 508 aa17.71■□□□□ 0.43
LIMS4-201ENST00000413601 NACAP1Q9BZK3 213 aa17.71■□□□□ 0.43
LIMS4-201ENST00000413601 SRRDQ9UH36 339 aa17.71■□□□□ 0.43
LIMS4-201ENST00000413601 RBBP6Q7Z6E9 1792 aaKnown RBP17.71■□□□□ 0.43
LIMS4-201ENST00000413601 RLFQ13129 1914 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 ROBO3Q96MS0 1386 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 VCAM1P19320 739 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 HOXD10P28358 340 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 PRMT2P55345 433 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 HERVK_113P62684 666 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 SLC9C1Q4G0N8 1177 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 SIAH1Q8IUQ4 282 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 HELLSQ9NRZ9 838 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
LIMS4-201ENST00000413601 A0A0D9SFI3 127 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L15C9J2P7 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L13C9JLJ4 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L11C9JVI0 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L18D6R9N7 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L22D6RA61 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L17D6RBQ6 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L19D6RCP7 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L20D6RJB6 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 FOXP2O15409 715 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 PEX10O60683 326 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 RASA1P20936 1047 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 ICA1Q05084 483 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 USP17L24Q0WX57 530 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 NAPBQ9H115 298 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 MKNK2Q9HBH9 465 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 GABRQQ9UN88 632 aa17.69■□□□□ 0.42
LIMS4-201ENST00000413601 HTTP42858 3142 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 PDE4AP27815 886 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 RGS19P49795 217 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 PRKCZQ05513 592 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 NMIQ13287 307 aaPredicted RBP17.68■□□□□ 0.42
LIMS4-201ENST00000413601 MCMDC2Q4G0Z9 681 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 VPS53Q5VIR6 699 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 CATSPERGQ6ZRH7 1159 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 ARMC5Q96C12 935 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
LIMS4-201ENST00000413601 ARHGEF10LQ9HCE6 1279 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 TXNRD2Q9NNW7 524 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
LIMS4-201ENST00000413601 COL11A1P12107 1806 aaPredicted RBP17.68■□□□□ 0.42
LIMS4-201ENST00000413601 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
LIMS4-201ENST00000413601 PRDM1O75626 825 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 EEF2P13639 858 aaKnown RBP17.67■□□□□ 0.42
LIMS4-201ENST00000413601 SDSP20132 328 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 ATP2B2Q01814 1243 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 KIAA1755Q5JYT7 1200 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 POTEEQ6S8J3 1075 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 NBPF11Q86T75 865 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 RAET1EQ8TD07 263 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.67■□□□□ 0.42
LIMS4-201ENST00000413601 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 RBPJLQ9UBG7 517 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 TMX2Q9Y320 296 aa17.67■□□□□ 0.42
LIMS4-201ENST00000413601 PPARAQ07869 468 aa17.66■□□□□ 0.42
LIMS4-201ENST00000413601 COA7Q96BR5 231 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms