RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 A0A1W2PRG0 241 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 ZFYP08048 801 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 HOXA7P31268 230 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 GCLCP48506 637 aaPredicted RBP12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 FLT3LGP49771 235 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 PRMT2P55345 433 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 HERVK_113P62684 666 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 MTFR1Q15390 333 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 Q3C1V9 767 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 TXNRD2Q9NNW7 524 aa12.21□□□□□ -0.45
NCKIPSD-202ENST00000413374 SALL3Q9BXA9 1300 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L15C9J2P7 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 PATL2C9JE40 543 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L13C9JLJ4 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L11C9JVI0 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L18D6R9N7 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 ELNP15502 786 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 GRK4P32298 578 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 TDO2P48775 406 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 PDE1AP54750 535 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 FAM110CQ1W6H9 321 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 CCDC129Q6ZRS4 1044 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 C16orf86Q6ZW13 317 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 COA7Q96BR5 231 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 KIAA1683Q9H0B3 1180 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 RPAP3Q9H6T3 665 aaPredicted RBP12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
NCKIPSD-202ENST00000413374 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 SIPA1L1O43166 1804 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 RAD21O60216 631 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 ADCY3O60266 1144 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 VCAM1P19320 739 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 USP14P54578 494 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 KIAA1755Q5JYT7 1200 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 POTEEQ6S8J3 1075 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 CATSPERGQ6ZRH7 1159 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 SIAH1Q8IUQ4 282 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 SPICE1Q8N0Z3 855 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 GPRC5AQ8NFJ5 357 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 RILPL2Q969X0 211 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 MKNK2Q9HBH9 465 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 ARPP21Q9UBL0 812 aaPredicted RBP12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 STAP2Q9UGK3 403 aa12.19□□□□□ -0.46
NCKIPSD-202ENST00000413374 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 PRDM1O75626 825 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 GNAT2P19087 354 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 AAMPQ13685 434 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 CHD1LQ86WJ1 897 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 CCAR1Q8IX12 1150 aaKnown RBP12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 SMC5Q8IY18 1101 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 C12orf42Q96LP6 360 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 CCDC17Q96LX7 622 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 ZSWIM8A7E2V4 1837 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 LAMB1P07942 1786 aa12.18□□□□□ -0.46
NCKIPSD-202ENST00000413374 EEF2P13639 858 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 CYP2B6P20813 491 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 ICA1Q05084 483 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 SBK1Q52WX2 424 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 WDR78Q5VTH9 848 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 TANGO6Q9C0B7 1094 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 PORCNQ9H237 461 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 ARHGEF10LQ9HCE6 1279 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 CWC22Q9HCG8 908 aaKnown RBP12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 MORF4L1Q9UBU8 362 aa12.17□□□□□ -0.46
NCKIPSD-202ENST00000413374 CNMDO75829 334 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 CCL5P13501 91 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 RASA1P20936 1047 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 ERVK-9P63128 1117 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 ERVK-24P63145 666 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 UBXN2AP68543 259 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 NUCB1Q02818 461 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 GIMAP6Q6P9H5 292 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 PLEKHM2Q8IWE5 1019 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 RNF208Q9H0X6 261 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 NAPBQ9H115 298 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 UNC93B1Q9H1C4 597 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 BTBD7Q9P203 1132 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 GJD2Q9UKL4 321 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 TMX2Q9Y320 296 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 PHIPQ8WWQ0 1821 aa12.16□□□□□ -0.46
NCKIPSD-202ENST00000413374 INHAP05111 366 aa12.15□□□□□ -0.46
NCKIPSD-202ENST00000413374 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms