RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
CPSF7-204ENST00000413232 C12orf42Q96LP6 360 aa23.32■■□□□ 1.32
CPSF7-204ENST00000413232 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.32■■□□□ 1.323e-8■■■□□ 15.8
CPSF7-204ENST00000413232 HMMRO75330 724 aa23.31■■□□□ 1.32
CPSF7-204ENST00000413232 ERVK-9P63128 1117 aa23.31■■□□□ 1.32
CPSF7-204ENST00000413232 ERVK-24P63145 666 aa23.31■■□□□ 1.32
CPSF7-204ENST00000413232 LCORLQ8N3X6 602 aa23.31■■□□□ 1.32
CPSF7-204ENST00000413232 PAGR1Q9BTK6 254 aa23.31■■□□□ 1.32
CPSF7-204ENST00000413232 BOLA2Q9H3K6 86 aa23.31■■□□□ 1.32
CPSF7-204ENST00000413232 RAB11FIP3O75154 756 aa23.3■■□□□ 1.32
CPSF7-204ENST00000413232 CNMDO75829 334 aa23.3■■□□□ 1.32
CPSF7-204ENST00000413232 POLR3DP05423 398 aaPredicted RBP23.3■■□□□ 1.32
CPSF7-204ENST00000413232 CYP2D6P10635 497 aa23.3■■□□□ 1.32
CPSF7-204ENST00000413232 CHRDL2Q6WN34 429 aa23.3■■□□□ 1.32
CPSF7-204ENST00000413232 DIS3LQ8TF46 1054 aaKnown RBP23.3■■□□□ 1.32
CPSF7-204ENST00000413232 FEZ1Q99689 392 aa23.3■■□□□ 1.32
CPSF7-204ENST00000413232 HTATIP2Q9BUP3 242 aa23.3■■□□□ 1.32
CPSF7-204ENST00000413232 DCP1AQ9NPI6 582 aaPredicted RBP23.3■■□□□ 1.32
CPSF7-204ENST00000413232 RLFQ13129 1914 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 SMIM22K7EJ46 135 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 SEPT2Q15019 361 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 USP6NLQ92738 828 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 PAWRQ96IZ0 340 aaKnown RBP23.29■■□□□ 1.32
CPSF7-204ENST00000413232 CRNKL1Q9BZJ0 848 aaKnown RBP23.29■■□□□ 1.32
CPSF7-204ENST00000413232 KIAA1683Q9H0B3 1180 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 MCM9Q9NXL9 1143 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 RPTORQ8N122 1335 aa23.29■■□□□ 1.32
CPSF7-204ENST00000413232 PRKAB2O43741 272 aa23.28■■□□□ 1.32
CPSF7-204ENST00000413232 VCAM1P19320 739 aa23.28■■□□□ 1.32
CPSF7-204ENST00000413232 MNX1P50219 401 aaPredicted RBP23.28■■□□□ 1.32
CPSF7-204ENST00000413232 CATSPERGQ6ZRH7 1159 aa23.28■■□□□ 1.32
CPSF7-204ENST00000413232 SLC44A5Q8NCS7 719 aa23.28■■□□□ 1.32
CPSF7-204ENST00000413232 NUDT12Q9BQG2 462 aa23.28■■□□□ 1.32
CPSF7-204ENST00000413232 ARMT1Q9H993 441 aa23.28■■□□□ 1.32
CPSF7-204ENST00000413232 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
CPSF7-204ENST00000413232 A0A1W2PRG0 241 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L15C9J2P7 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L13C9JLJ4 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L11C9JVI0 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L18D6R9N7 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L22D6RA61 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L17D6RBQ6 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L19D6RCP7 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L20D6RJB6 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 ATP5JP18859 108 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 ADD2P35612 726 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 USP17L24Q0WX57 530 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 CCL14Q16627 93 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 MORN1Q5T089 497 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 MAP3K21Q5TCX8 1036 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 GPR142Q7Z601 462 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 HMX1Q9NP08 348 aaPredicted RBP23.27■■□□□ 1.32
CPSF7-204ENST00000413232 PAG1Q9NWQ8 432 aa23.27■■□□□ 1.32
CPSF7-204ENST00000413232 SMARCA5O60264 1052 aaPredicted RBP23.26■■□□□ 1.31
CPSF7-204ENST00000413232 MAPK4P31152 587 aa23.26■■□□□ 1.31
CPSF7-204ENST00000413232 DYNLL2Q96FJ2 89 aa23.26■■□□□ 1.31
CPSF7-204ENST00000413232 PRO3102Q9H379 93 aa23.26■■□□□ 1.31
CPSF7-204ENST00000413232 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
CPSF7-204ENST00000413232 XRCC5P13010 732 aaKnown RBP23.25■■□□□ 1.31
CPSF7-204ENST00000413232 SOCS4Q8WXH5 440 aa23.25■■□□□ 1.31
CPSF7-204ENST00000413232 HAUS7Q99871 368 aa23.25■■□□□ 1.31
CPSF7-204ENST00000413232 BTBD7Q9P203 1132 aa23.25■■□□□ 1.31
CPSF7-204ENST00000413232 RABGAP1Q9Y3P9 1069 aa23.25■■□□□ 1.31
CPSF7-204ENST00000413232 MBD4O95243 580 aa23.24■■□□□ 1.31
CPSF7-204ENST00000413232 PRKAR2AP13861 404 aaKnown RBP23.24■■□□□ 1.31
CPSF7-204ENST00000413232 USP14P54578 494 aa23.24■■□□□ 1.31
CPSF7-204ENST00000413232 KIAA1755Q5JYT7 1200 aa23.24■■□□□ 1.31
CPSF7-204ENST00000413232 PLEKHH3Q7Z736 793 aa23.24■■□□□ 1.31
CPSF7-204ENST00000413232 GTF3C2Q8WUA4 911 aaPredicted RBP23.24■■□□□ 1.31
CPSF7-204ENST00000413232 RPAP3Q9H6T3 665 aaPredicted RBP23.24■■□□□ 1.31
CPSF7-204ENST00000413232 CYP2D7A0A087X1C5 515 aa23.23■■□□□ 1.31
CPSF7-204ENST00000413232 CACNB2Q08289 660 aaPredicted RBP23.23■■□□□ 1.31
CPSF7-204ENST00000413232 CLEC10AQ8IUN9 316 aa23.23■■□□□ 1.31
CPSF7-204ENST00000413232 SIAH1Q8IUQ4 282 aa23.23■■□□□ 1.31
CPSF7-204ENST00000413232 NR2E3Q9Y5X4 410 aa23.23■■□□□ 1.31
CPSF7-204ENST00000413232 PARP14Q460N5 1801 aa23.23■■□□□ 1.31
CPSF7-204ENST00000413232 FRMPD3Q5JV73 1810 aa23.23■■□□□ 1.31
CPSF7-204ENST00000413232 SPDYE16A6NNV3 312 aaPredicted RBP23.22■■□□□ 1.31
CPSF7-204ENST00000413232 MPHOSPH10O00566 681 aaKnown RBP23.22■■□□□ 1.31
CPSF7-204ENST00000413232 EVI5O60447 810 aa23.22■■□□□ 1.31
CPSF7-204ENST00000413232 CAPN2P17655 700 aa23.22■■□□□ 1.31
CPSF7-204ENST00000413232 PDE3AQ14432 1141 aa23.22■■□□□ 1.31
CPSF7-204ENST00000413232 LBX2Q6XYB7 198 aa23.22■■□□□ 1.31
CPSF7-204ENST00000413232 NECAB2Q7Z6G3 386 aa23.22■■□□□ 1.31
CPSF7-204ENST00000413232 CCAR1Q8IX12 1150 aaKnown RBP23.22■■□□□ 1.31
CPSF7-204ENST00000413232 OGDHLQ9ULD0 1010 aa23.22■■□□□ 1.31
CPSF7-204ENST00000413232 CCND3P30281 292 aaPredicted RBP23.21■■□□□ 1.31
CPSF7-204ENST00000413232 ANKLE1Q8NAG6 615 aa23.21■■□□□ 1.31
CPSF7-204ENST00000413232 LRRCC1Q9C099 1032 aa23.21■■□□□ 1.31
CPSF7-204ENST00000413232 CHMP4BQ9H444 224 aaKnown RBP23.21■■□□□ 1.31
CPSF7-204ENST00000413232 FLRT1Q9NZU1 646 aa23.21■■□□□ 1.31
CPSF7-204ENST00000413232 ZNFX1Q9P2E3 1918 aaKnown RBP23.21■■□□□ 1.31
CPSF7-204ENST00000413232 LAMA3Q16787 3333 aa23.21■■□□□ 1.31
CPSF7-204ENST00000413232 AKR1B1P15121 316 aa23.2■■□□□ 1.3
CPSF7-204ENST00000413232 ZKSCAN1P17029 563 aaPredicted RBP23.2■■□□□ 1.3
CPSF7-204ENST00000413232 RGS2P41220 211 aa23.2■■□□□ 1.3
CPSF7-204ENST00000413232 DNAH12Q6ZR08 3092 aa23.2■■□□□ 1.3
CPSF7-204ENST00000413232 MAP2K5Q13163 448 aa23.19■■□□□ 1.3
CPSF7-204ENST00000413232 C12orf60Q5U649 245 aa23.19■■□□□ 1.3
CPSF7-204ENST00000413232 APBA2Q99767 749 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms