RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MAP3K12Q12852 859 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 KIF4BQ2VIQ3 1234 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 USP49Q70CQ1 688 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 L1RE1Q9UN81 338 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 ATF3P18847 181 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 PIP4K2BP78356 416 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 LPIN2Q92539 896 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 FERMT2Q96AC1 680 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 PAGE5Q96GU1 130 aa20.01■□□□□ 0.79
SDCBP-202ENST00000413219 PUF60Q9UHX1 559 aaKnown RBP20.01■□□□□ 0.79
SDCBP-202ENST00000413219 ARAP2Q8WZ64 1704 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 GSG1L2A8MUP6 293 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 CD44P16070 742 aaKnown RBP20■□□□□ 0.79
SDCBP-202ENST00000413219 ACTN2P35609 894 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 DPYDQ12882 1025 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 FANCBQ8NB91 859 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 NAPGQ99747 312 aaPredicted RBP20■□□□□ 0.79
SDCBP-202ENST00000413219 RNF26Q9BY78 433 aaPredicted RBP20■□□□□ 0.79
SDCBP-202ENST00000413219 NACAP1Q9BZK3 213 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 ZSWIM4Q9H7M6 989 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 CABP5Q9NP86 173 aa20■□□□□ 0.79
SDCBP-202ENST00000413219 PPP1R3GB7ZBB8 358 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 GYPCP04921 128 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 XBP1P17861 261 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 FGFR2P21802 821 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 LMAN1P49257 510 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 TRIM14Q14142 442 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 PUM3Q15397 648 aaKnown RBP19.99■□□□□ 0.79
SDCBP-202ENST00000413219 NLRP10Q86W26 655 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 OXER1Q8TDS5 423 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 PNKPQ96T60 521 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 DOCK2Q92608 1830 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 SPATA31A3Q5VYP0 1347 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 PNPLA7Q6ZV29 1317 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 CASP14P31944 242 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
SDCBP-202ENST00000413219 RNF41Q9H4P4 317 aaPredicted RBP19.99■□□□□ 0.79
SDCBP-202ENST00000413219 PDE11AQ9HCR9 933 aa19.99■□□□□ 0.79
SDCBP-202ENST00000413219 LIMA1Q9UHB6 759 aaKnown RBP19.99■□□□□ 0.79
SDCBP-202ENST00000413219 LRP5O75197 1615 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 A0A087X0B3 334 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 CTAGE15A4D2H0 777 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 LRRC10BA6NIK2 292 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 CTAGE8P0CG41 777 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 CTAGE6Q86UF2 777 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 CTAGE4Q8IX94 777 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 SLC35F6Q8N357 371 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 MAGEB6Q8N7X4 407 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 SPATA5Q8NB90 893 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 CPLX3Q8WVH0 158 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 MROH5Q6ZUA9 1318 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 RPS6KA5O75582 802 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 SPAG1Q07617 926 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 KLHL10Q6JEL2 608 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 ABCB6Q9NP58 842 aa19.98■□□□□ 0.79
SDCBP-202ENST00000413219 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
SDCBP-202ENST00000413219 IVLP07476 585 aa19.97■□□□□ 0.79
SDCBP-202ENST00000413219 AFMP43652 599 aa19.97■□□□□ 0.79
SDCBP-202ENST00000413219 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
SDCBP-202ENST00000413219 STX17P56962 302 aa19.97■□□□□ 0.79
SDCBP-202ENST00000413219 CYP26C1Q6V0L0 522 aa19.97■□□□□ 0.79
SDCBP-202ENST00000413219 SYNE4Q8N205 404 aa19.97■□□□□ 0.79
SDCBP-202ENST00000413219 ZNF330Q9Y3S2 320 aaPredicted RBP19.97■□□□□ 0.79
SDCBP-202ENST00000413219 A0A0U1RQJ8 604 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 IRS4O14654 1257 aaPredicted RBP19.96■□□□□ 0.79
SDCBP-202ENST00000413219 GYS2P54840 703 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 MCM6Q14566 821 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 ATRIPQ8WXE1 791 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 EPSTI1Q96J88 318 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 ACBD3Q9H3P7 528 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 MYH3P11055 1940 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 PDE8AO60658 829 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 ATP2B1P20020 1258 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 KRT2P35908 639 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 TDO2P48775 406 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 AKAP17AQ02040 695 aaKnown RBP19.96■□□□□ 0.79
SDCBP-202ENST00000413219 RRP12Q5JTH9 1297 aaKnown RBP19.96■□□□□ 0.79
SDCBP-202ENST00000413219 LEKR1Q6ZMV7 388 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 SYMPKQ92797 1274 aaKnown RBP19.96■□□□□ 0.79
SDCBP-202ENST00000413219 PYM1Q9BRP8 204 aaKnown RBP19.96■□□□□ 0.79
SDCBP-202ENST00000413219 PHF20Q9BVI0 1012 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 VPS18Q9P253 973 aa19.96■□□□□ 0.79
SDCBP-202ENST00000413219 STARD3NLO95772 234 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 SLC5A1P13866 664 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 IL2RBP14784 551 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 ARHGAP25P42331 645 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 FAM71BQ8TC56 605 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 TRERF1Q96PN7 1200 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 ABHD10Q9NUJ1 306 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 ERVK-24P63145 666 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 KRT31Q15323 416 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 WDR93Q6P2C0 686 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 CCDC82Q8N4S0 544 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 ACRBPQ8NEB7 543 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 ZKSCAN3Q9BRR0 538 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 UBAC1Q9BSL1 405 aa19.95■□□□□ 0.78
SDCBP-202ENST00000413219 TOMM22Q9NS69 142 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms