RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 RRP1BQ14684 758 aaKnown RBP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 CFAP100Q494V2 611 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 GRIPAP1Q4V328 841 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 NOM1Q5C9Z4 860 aaKnown RBP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 RSBN1LQ6PCB5 846 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 CLEC10AQ8IUN9 316 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 SIAH1Q8IUQ4 282 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 SPATA32Q96LK8 384 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 IDI2Q9BXS1 227 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 SCAND2PQ9GZW5 306 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 RBSNQ9H1K0 784 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 RTEL1Q9NZ71 1219 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 TAOK2Q9UL54 1235 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 KIF3AQ9Y496 699 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 ADAMTSL1Q8N6G6 1762 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 ELP1O95163 1332 aa10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 ZNF646O15015 1829 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P34-201ENST00000413023 FAM196BA6NMK8 535 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 NFKBIEO00221 500 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 CYTH3O43739 400 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 NPM3O75607 178 aaKnown RBP10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 GRM4Q14833 912 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 PPP2R5BQ15173 497 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 NPY5RQ15761 445 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 EARS2Q5JPH6 523 aaKnown RBP10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 CPLX2Q6PUV4 134 aaKnown RBP10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 MAP3K14Q99558 947 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 CPVLQ9H3G5 476 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 MAD2L2Q9UI95 211 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 SERPINA10Q9UK55 444 aa10.02□□□□□ -0.81
HMGN1P34-201ENST00000413023 CCDC196A0A1B0GTZ2 297 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 SYCE3A1L190 88 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PALM3A6NDB9 673 aaPredicted RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 GOLGA6L3A6NEY3 463 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 DEXIO95424 95 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 MMP1P03956 469 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 CALM1P0DP23 149 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 CALM2P0DP24 149 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 CALM3P0DP25 149 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 POLD1P28340 1107 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 NR5A1Q13285 461 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PTPAQ15257 358 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 LINC00301Q8NCQ3 95 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 NLGN2Q8NFZ4 835 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 CEP95Q96GE4 821 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 ZBED3Q96IU2 234 aaPredicted RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 ZNF396Q96N95 335 aaPredicted RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 RNF26Q9BY78 433 aaPredicted RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 VPS33BQ9H267 617 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 GOLPH3LQ9H4A5 285 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 KAT14Q9H8E8 782 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 RBM28Q9NW13 759 aaKnown RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PPP1R1BQ9UD71 204 aaPredicted RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PGAP2Q9UHJ9 254 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 ZNRF3Q9ULT6 936 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 PCDHA7Q9UN72 937 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 CD2APQ9Y5K6 639 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 DDX60LQ5H9U9 1706 aaKnown RBP10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 CNTNAP5Q8WYK1 1306 aa10.01□□□□□ -0.81
HMGN1P34-201ENST00000413023 WNT7AO00755 349 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 NASPP49321 788 aaPredicted RBP10□□□□□ -0.81
HMGN1P34-201ENST00000413023 CCDC178Q5BJE1 867 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 AXDND1Q5T1B0 1012 aaPredicted RBP10□□□□□ -0.81
HMGN1P34-201ENST00000413023 ANO1Q5XXA6 986 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 ATL3Q6DD88 541 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 BRAPQ7Z569 592 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 AMOTL1Q8IY63 956 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 ENGASEQ8NFI3 743 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 PIBF1Q8WXW3 757 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 TNFRSF25Q93038 417 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 PHF20Q9BVI0 1012 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 GRPEL1Q9HAV7 217 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 MTMR4Q9NYA4 1195 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 VPS54Q9P1Q0 977 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 ZNF70Q9UC06 446 aaPredicted RBP10□□□□□ -0.81
HMGN1P34-201ENST00000413023 SERPINB13Q9UIV8 391 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 CFAP45Q9UL16 551 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 CDK5RAP2Q96SN8 1893 aa10□□□□□ -0.81
HMGN1P34-201ENST00000413023 TCHHQ07283 1943 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 KIF13BQ9NQT8 1826 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 SPDYE2BA6NHP3 402 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 USP17L5A8MUK1 530 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 NR1I2O75469 434 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 SPDYE6P0CI01 402 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 TOP1P11387 765 aaKnown RBP9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 NT5C2P49902 561 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 SNW1Q13573 536 aaKnown RBP9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 SLC39A14Q15043 492 aa9.99□□□□□ -0.81
HMGN1P34-201ENST00000413023 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms