RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 TRIM6-TRIM34B2RNG4 842 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 PATL2C9JE40 543 aaKnown RBP22.56■■□□□ 1.2
TRIM56-202ENST00000412507 AKR1B1P15121 316 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 OSBPP22059 807 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 USP17L2Q6R6M4 530 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 CCDC129Q6ZRS4 1044 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 ASCC2Q9H1I8 757 aaPredicted RBP22.56■■□□□ 1.2
TRIM56-202ENST00000412507 OSBPL3Q9H4L5 887 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 EMILIN3Q9NT22 766 aa22.56■■□□□ 1.2
TRIM56-202ENST00000412507 PARP14Q460N5 1801 aa22.55■■□□□ 1.2
TRIM56-202ENST00000412507 PSMC4P43686 418 aa22.55■■□□□ 1.2
TRIM56-202ENST00000412507 TDO2P48775 406 aa22.55■■□□□ 1.2
TRIM56-202ENST00000412507 IFNL3Q8IZI9 196 aa22.55■■□□□ 1.2
TRIM56-202ENST00000412507 STK11IPQ8N1F8 1099 aa22.55■■□□□ 1.2
TRIM56-202ENST00000412507 RILPL2Q969X0 211 aa22.55■■□□□ 1.2
TRIM56-202ENST00000412507 HTTP42858 3142 aa22.54■■□□□ 1.2
TRIM56-202ENST00000412507 TMEM179Q6ZVK1 233 aa22.54■■□□□ 1.2
TRIM56-202ENST00000412507 ANKRD13CQ8N6S4 541 aa22.54■■□□□ 1.2
TRIM56-202ENST00000412507 RLFQ13129 1914 aa22.53■■□□□ 1.2
TRIM56-202ENST00000412507 FMNL1O95466 1100 aaPredicted RBP22.53■■□□□ 1.2
TRIM56-202ENST00000412507 HOXA7P31268 230 aaPredicted RBP22.53■■□□□ 1.2
TRIM56-202ENST00000412507 IRX3P78415 501 aaPredicted RBP22.53■■□□□ 1.2
TRIM56-202ENST00000412507 TRIM47Q96LD4 638 aa22.53■■□□□ 1.2
TRIM56-202ENST00000412507 C12orf42Q96LP6 360 aa22.53■■□□□ 1.2
TRIM56-202ENST00000412507 CCDC17Q96LX7 622 aa22.53■■□□□ 1.2
TRIM56-202ENST00000412507 KIAA1683Q9H0B3 1180 aa22.53■■□□□ 1.2
TRIM56-202ENST00000412507 ROBO3Q96MS0 1386 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 USP14P54578 494 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 CLEC10AQ8IUN9 316 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 FAM227BQ96M60 508 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 NACAP1Q9BZK3 213 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 HELLSQ9NRZ9 838 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 PTCH2Q9Y6C5 1203 aa22.52■■□□□ 1.2
TRIM56-202ENST00000412507 A0A0D9SFI3 127 aa22.51■■□□□ 1.19
TRIM56-202ENST00000412507 A0A1W2PRG0 241 aa22.51■■□□□ 1.19
TRIM56-202ENST00000412507 GNRH1P01148 92 aa22.51■■□□□ 1.19
TRIM56-202ENST00000412507 PDE4AP27815 886 aa22.51■■□□□ 1.19
TRIM56-202ENST00000412507 P2RX7Q99572 595 aaKnown RBP22.51■■□□□ 1.19
TRIM56-202ENST00000412507 NAPBQ9H115 298 aa22.51■■□□□ 1.19
TRIM56-202ENST00000412507 KIAA0100Q14667 2235 aaKnown RBP22.51■■□□□ 1.19
TRIM56-202ENST00000412507 RBBP6Q7Z6E9 1792 aaKnown RBP22.5■■□□□ 1.19
TRIM56-202ENST00000412507 PLXNB2O15031 1838 aa22.5■■□□□ 1.19
TRIM56-202ENST00000412507 GCLCP48506 637 aaPredicted RBP22.5■■□□□ 1.19
TRIM56-202ENST00000412507 FCGRTP55899 365 aa22.5■■□□□ 1.19
TRIM56-202ENST00000412507 SOX10P56693 466 aa22.5■■□□□ 1.19
TRIM56-202ENST00000412507 NMIQ13287 307 aaPredicted RBP22.5■■□□□ 1.19
TRIM56-202ENST00000412507 FAM110CQ1W6H9 321 aa22.5■■□□□ 1.19
TRIM56-202ENST00000412507 MKNK2Q9HBH9 465 aa22.5■■□□□ 1.19
TRIM56-202ENST00000412507 COL11A1P12107 1806 aaPredicted RBP22.5■■□□□ 1.19
TRIM56-202ENST00000412507 FOXP2O15409 715 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 VCAM1P19320 739 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 HERVK_113P62684 666 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 ICA1Q05084 483 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 MCMDC2Q4G0Z9 681 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 VPS53Q5VIR6 699 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 SIAH1Q8IUQ4 282 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 ARHGEF10LQ9HCE6 1279 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 SRRDQ9UH36 339 aa22.49■■□□□ 1.19
TRIM56-202ENST00000412507 RASA1P20936 1047 aa22.48■■□□□ 1.19
TRIM56-202ENST00000412507 HOXD10P28358 340 aa22.48■■□□□ 1.19
TRIM56-202ENST00000412507 PRMT2P55345 433 aa22.48■■□□□ 1.19
TRIM56-202ENST00000412507 CENPFP49454 3210 aa22.48■■□□□ 1.19
TRIM56-202ENST00000412507 MYPNQ86TC9 1320 aa22.48■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L15C9J2P7 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L13C9JLJ4 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L11C9JVI0 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L18D6R9N7 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L22D6RA61 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L17D6RBQ6 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L19D6RCP7 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L20D6RJB6 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 PEX10O60683 326 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 PRDM1O75626 825 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 SDSP20132 328 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 USP17L24Q0WX57 530 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 CATSPERGQ6ZRH7 1159 aa22.47■■□□□ 1.19
TRIM56-202ENST00000412507 EEF2P13639 858 aaKnown RBP22.46■■□□□ 1.19
TRIM56-202ENST00000412507 ATP2B2Q01814 1243 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 PPARAQ07869 468 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 KIAA1755Q5JYT7 1200 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.46■■□□□ 1.19
TRIM56-202ENST00000412507 RPAP3Q9H6T3 665 aaPredicted RBP22.46■■□□□ 1.19
TRIM56-202ENST00000412507 KANSL2Q9H9L4 492 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 TXNRD2Q9NNW7 524 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 MORF4L1Q9UBU8 362 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 GABRQQ9UN88 632 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 TMX2Q9Y320 296 aa22.46■■□□□ 1.19
TRIM56-202ENST00000412507 LAMA4Q16363 1823 aa22.45■■□□□ 1.19
TRIM56-202ENST00000412507 TNPO2O14787 897 aaKnown RBP22.45■■□□□ 1.18
TRIM56-202ENST00000412507 PRKCZQ05513 592 aa22.45■■□□□ 1.18
TRIM56-202ENST00000412507 SLC9C1Q4G0N8 1177 aa22.45■■□□□ 1.18
TRIM56-202ENST00000412507 ZNF589Q86UQ0 364 aaPredicted RBP22.45■■□□□ 1.18
TRIM56-202ENST00000412507 ARMC5Q96C12 935 aa22.45■■□□□ 1.18
TRIM56-202ENST00000412507 SH2D4AQ9H788 454 aa22.45■■□□□ 1.18
TRIM56-202ENST00000412507 RBPJLQ9UBG7 517 aa22.45■■□□□ 1.18
TRIM56-202ENST00000412507 A0A0G2JMZ2 1700 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 POTEEQ6S8J3 1075 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
TRIM56-202ENST00000412507 ZNF444Q8N0Y2 327 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms