RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PTPRFP10586 1907 aa14.26□□□□□ -0.13
NEDD1-202ENST00000411739 PEX10O60683 326 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 TMEM179Q6ZVK1 233 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 ZNF444Q8N0Y2 327 aaPredicted RBP14.25□□□□□ -0.13
NEDD1-202ENST00000411739 TMOD4Q9NZQ9 345 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 LAMB1P07942 1786 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 ICA1Q05084 483 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 KIAA1755Q5JYT7 1200 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 TICAM2Q86XR7 235 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 NKX2-3Q8TAU0 364 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 TOMM22Q9NS69 142 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 GINM1Q9NU53 330 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 AGTPBP1Q9UPW5 1226 aa14.25□□□□□ -0.13
NEDD1-202ENST00000411739 ROBO3Q96MS0 1386 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 RAD21O60216 631 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 FKTNO75072 461 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 ALX1Q15699 326 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 SH3D19Q5HYK7 790 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
NEDD1-202ENST00000411739 CD99L2Q8TCZ2 262 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 CCDC17Q96LX7 622 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 CFHR5Q9BXR6 569 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 MYH8P13535 1937 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 TLR2O60603 784 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 EEF2P13639 858 aaKnown RBP14.24□□□□□ -0.13
NEDD1-202ENST00000411739 MFAP1P55081 439 aaKnown RBP14.24□□□□□ -0.13
NEDD1-202ENST00000411739 PTH1RQ03431 593 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 SPICE1Q8N0Z3 855 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 TBC1D2Q9BYX2 928 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 NBPF3Q9H094 633 aa14.24□□□□□ -0.13
NEDD1-202ENST00000411739 C19orf81C9J6K1 198 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 SLC3A2P08195 630 aaKnown RBP14.23□□□□□ -0.13
NEDD1-202ENST00000411739 TFAP4Q01664 338 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 PDE4BQ07343 736 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 USP17L2Q6R6M4 530 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
NEDD1-202ENST00000411739 ARHGAP39Q9C0H5 1083 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 NMT2O60551 498 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 TBC1D10CQ8IV04 446 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 TNS4Q8IZW8 715 aa14.23□□□□□ -0.13
NEDD1-202ENST00000411739 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
NEDD1-202ENST00000411739 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
NEDD1-202ENST00000411739 RANBP6O60518 1105 aaKnown RBP14.22□□□□□ -0.13
NEDD1-202ENST00000411739 SP3Q02447 781 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 BMP2KLQ5H9B9 411 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 ERICH6BQ5W0A0 696 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
NEDD1-202ENST00000411739 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
NEDD1-202ENST00000411739 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
NEDD1-202ENST00000411739 KIAA1683Q9H0B3 1180 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.22□□□□□ -0.13
NEDD1-202ENST00000411739 TSPY3P0CV98 308 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 TSPY8P0CW00 308 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 C17orf99Q6UX52 265 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 CEP95Q96GE4 821 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
NEDD1-202ENST00000411739 SGSM2O43147 1006 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 VCAM1P19320 739 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ANKRD13CQ8N6S4 541 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ARHGEF10LQ9HCE6 1279 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ZCCHC17Q9NP64 241 aaKnown RBP14.21□□□□□ -0.13
NEDD1-202ENST00000411739 CLIP2Q9UDT6 1046 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ANAPC4Q9UJX5 808 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ADGRA2Q96PE1 1338 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ZNF213O14771 459 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 CTGFP29279 349 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 IRX3P78415 501 aaPredicted RBP14.21□□□□□ -0.13
NEDD1-202ENST00000411739 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 RPAP3Q9H6T3 665 aaPredicted RBP14.21□□□□□ -0.13
NEDD1-202ENST00000411739 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
NEDD1-202ENST00000411739 TSPY2A6NKD2 308 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 OSBPP22059 807 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 USP14P54578 494 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 TMX2Q9Y320 296 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
NEDD1-202ENST00000411739 NEDD1Q8NHV4 660 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 NUP88Q99567 741 aaPredicted RBP14.2□□□□□ -0.14
NEDD1-202ENST00000411739 MCOLN1Q9GZU1 580 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 IL17RBQ9NRM6 502 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 TRIM17Q9Y577 477 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 NEDD4P46934 1319 aa14.2□□□□□ -0.14
NEDD1-202ENST00000411739 LOC285556D6RIA3 1793 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 IGKV6D-41A0A0C4DH26 115 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 AKNAD1Q5T1N1 836 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 POTEEQ6S8J3 1075 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 MFSD6Q6ZSS7 791 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 C12orf42Q96LP6 360 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 MTMR4Q9NYA4 1195 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 TAOK2Q9UL54 1235 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 MTMR7Q9Y216 660 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 ZSWIM8A7E2V4 1837 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 ZMYM6O95789 1325 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 BCRP11274 1271 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 HOXA7P31268 230 aaPredicted RBP14.19□□□□□ -0.14
NEDD1-202ENST00000411739 PABPC4Q13310 644 aaKnown RBP eCLIP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms