RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 P4HA1P13674 534 aa20.38■□□□□ 0.85
HCG11-201ENST00000411553 TMTC1Q8IUR5 882 aa20.38■□□□□ 0.85
HCG11-201ENST00000411553 NELFBQ8WX92 580 aa20.38■□□□□ 0.85
HCG11-201ENST00000411553 NT5C3AQ9H0P0 336 aa20.38■□□□□ 0.85
HCG11-201ENST00000411553 USP21Q9UK80 565 aa20.38■□□□□ 0.85
HCG11-201ENST00000411553 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
HCG11-201ENST00000411553 KLHL30Q0D2K2 578 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 SYCE1Q8N0S2 351 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 MAGEA1P43355 309 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 FAM47AQ5JRC9 791 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 UHRF1BP1Q6BDS2 1440 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 RFX1P22670 979 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 SPOUT1Q5T280 376 aaKnown RBP20.37■□□□□ 0.85
HCG11-201ENST00000411553 GLG1Q92896 1179 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 TEKT1Q969V4 418 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 SLC5A4Q9NY91 659 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 YWHAEP62258 255 aaKnown RBP20.37■□□□□ 0.85
HCG11-201ENST00000411553 PPARAQ07869 468 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 TNFAIP1Q13829 316 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 TPH2Q8IWU9 490 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 TRIM31Q9BZY9 425 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 CSADQ9Y600 493 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 NDUFB9Q9Y6M9 179 aa20.37■□□□□ 0.85
HCG11-201ENST00000411553 CEP104O60308 925 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 SWAP70Q9UH65 585 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 RPS8P62241 208 aaKnown RBP20.36■□□□□ 0.85
HCG11-201ENST00000411553 TAOK1Q7L7X3 1001 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 ERO1AQ96HE7 468 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 RIOK1Q9BRS2 568 aaKnown RBP20.36■□□□□ 0.85
HCG11-201ENST00000411553 GTF2IP78347 998 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 SFMBT2Q5VUG0 894 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 SPC25Q9HBM1 224 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 GAS7O60861 476 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 TNNI1P19237 187 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 DSCC1Q9BVC3 393 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 GIGYF1O75420 1035 aaPredicted RBP20.36■□□□□ 0.85
HCG11-201ENST00000411553 GNPTABQ3T906 1256 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 EAPPQ56P03 285 aaPredicted RBP20.36■□□□□ 0.85
HCG11-201ENST00000411553 FAM173BQ6P4H8 233 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 MIER3Q7Z3K6 550 aa20.36■□□□□ 0.85
HCG11-201ENST00000411553 SEC24BO95487 1268 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 NFE2L3Q9Y4A8 694 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 PNMA6EA0A0J9YXQ4 647 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 SMCO2A6NFE2 343 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 BIRC2Q13490 618 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 LGSNQ5TDP6 509 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 CROCCP2Q86T23 111 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 ATP8A2Q9NTI2 1148 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 VPS54Q9P1Q0 977 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 MFSD14BQ5SR56 506 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 CCDC84Q86UT8 332 aaPredicted RBP20.35■□□□□ 0.85
HCG11-201ENST00000411553 DEPTORQ8TB45 409 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
HCG11-201ENST00000411553 KDM3AQ9Y4C1 1321 aa20.35■□□□□ 0.85
HCG11-201ENST00000411553 hCG_1642624A0A1W2PR95 340 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 ERCC3P19447 782 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 BAG6P46379 1132 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 GSDMBQ8TAX9 411 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 ERVV-2B6SEH9 535 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 E7EWF7 191 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 RPUSD2Q8IZ73 545 aaKnown RBP20.34■□□□□ 0.85
HCG11-201ENST00000411553 AFAP1L1Q8TED9 768 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 IWS1Q96ST2 819 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 SRGAP1Q7Z6B7 1085 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 NUCKS1Q9H1E3 243 aaKnown RBP20.34■□□□□ 0.85
HCG11-201ENST00000411553 CTSWP56202 376 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 IMPACTQ9P2X3 320 aa20.34■□□□□ 0.85
HCG11-201ENST00000411553 KMT5BQ4FZB7 885 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 GNA14O95837 355 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 CASC4Q6P4E1 433 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 MLXIPQ9HAP2 919 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 BLZF1Q9H2G9 400 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 MYO1AQ9UBC5 1043 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 TSKSQ9UJT2 592 aa20.33■□□□□ 0.85
HCG11-201ENST00000411553 KDM2BQ8NHM5 1336 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 CBX8Q9HC52 389 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 AFG3L2Q9Y4W6 797 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 ATP5JP18859 108 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 NEDD9Q14511 834 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 ARHGAP44Q17R89 818 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 CEP85LQ5SZL2 805 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 ARHGEF16Q5VV41 709 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 CCDC105Q8IYK2 499 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 MAIP1Q8WWC4 291 aa20.33■□□□□ 0.84
HCG11-201ENST00000411553 ZNF75DP51815 510 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 KLHL7Q8IXQ5 586 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 TACC3Q9Y6A5 838 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 COL17A1Q9UMD9 1497 aaPredicted RBP20.32■□□□□ 0.84
HCG11-201ENST00000411553 GTF2A1P52655 376 aaPredicted RBP20.32■□□□□ 0.84
HCG11-201ENST00000411553 RPS6KA1Q15418 735 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 PAGR1Q9BTK6 254 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 TTLL3Q9Y4R7 772 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 EIF4A1P60842 406 aaKnown RBP20.32■□□□□ 0.84
HCG11-201ENST00000411553 HHATQ5VTY9 493 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 PEX26Q7Z412 305 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 TESPA1A2RU30 521 aaPredicted RBP20.32■□□□□ 0.84
HCG11-201ENST00000411553 MCTP2Q6DN12 878 aa20.32■□□□□ 0.84
HCG11-201ENST00000411553 SDCCAG8Q86SQ7 713 aaPredicted RBP20.32■□□□□ 0.84
HCG11-201ENST00000411553 ZNF710Q8N1W2 664 aa20.31■□□□□ 0.84
HCG11-201ENST00000411553 METTL13Q8N6R0 699 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms