RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NUP133Q8WUM0 1156 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 ZNF622Q969S3 477 aaKnown RBP eCLIP15.63■□□□□ 0.09
LIMS1-205ENST00000410093 CCDC34Q96HJ3 373 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 ZKSCAN3Q9BRR0 538 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 MYL10Q9BUA6 226 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 MKRN1Q9UHC7 482 aaKnown RBP15.63■□□□□ 0.09
LIMS1-205ENST00000410093 MROH7-TTC4A0A0A0MT08 1334 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 ZNF202O95125 648 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 USP5P45974 858 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 DIS3L2Q8IYB7 885 aaKnown RBP15.63■□□□□ 0.09
LIMS1-205ENST00000410093 CD209Q9NNX6 404 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 KIAA1468Q9P260 1216 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 HPSEQ9Y251 543 aa15.63■□□□□ 0.09
LIMS1-205ENST00000410093 FAM205AQ6ZU69 1335 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 PPFIA3O75145 1194 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 UFL1O94874 794 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 NDUFA8P51970 172 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 TPM4P67936 248 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 GPSM2P81274 684 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 RESP18Q5W5W9 173 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 TMTC3Q6ZXV5 915 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 TXNRD3Q86VQ6 643 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 KRI1Q8N9T8 703 aaKnown RBP15.62■□□□□ 0.09
LIMS1-205ENST00000410093 ZNF526Q8TF50 670 aaPredicted RBP15.62■□□□□ 0.09
LIMS1-205ENST00000410093 AIFM3Q96NN9 605 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 MCM9Q9NXL9 1143 aa15.62■□□□□ 0.09
LIMS1-205ENST00000410093 FOCADQ5VW36 1801 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 CDK5RAP2Q96SN8 1893 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 GPR75-ASB3A0A0A6YYF3 556 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 A0A1B0GVL5 298 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 TSPY2A6NKD2 308 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 BECN2A8MW95 431 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 MYO1BO43795 1136 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 OFD1O75665 1012 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 KRT2P35908 639 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 SYKP43405 635 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 CCDC24Q8N4L8 307 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 LZTS2Q9BRK4 669 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 FAM13BQ9NYF5 915 aa15.61■□□□□ 0.09
LIMS1-205ENST00000410093 PFKFB1P16118 471 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 ALDH1B1P30837 517 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 TRAPPC10P48553 1259 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 FUT2Q10981 343 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 IQCB1Q15051 598 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 PLA2G4DQ86XP0 818 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 PHF20Q9BVI0 1012 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 TMX4Q9H1E5 349 aaPredicted RBP15.6■□□□□ 0.09
LIMS1-205ENST00000410093 DNAJC25Q9H1X3 360 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 SH3GLB2Q9NR46 395 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 GJB4Q9NTQ9 266 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 TAOK2Q9UL54 1235 aa15.6■□□□□ 0.09
LIMS1-205ENST00000410093 SMTNL1A8MU46 457 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 NPR1P16066 1061 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 PTPREP23469 700 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 CALML3P27482 149 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 NLRP12P59046 1061 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 LUZP1Q86V48 1076 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 MRFAP1L1Q96HT8 127 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 PYM1Q9BRP8 204 aaKnown RBP15.59■□□□□ 0.09
LIMS1-205ENST00000410093 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.59■□□□□ 0.09
LIMS1-205ENST00000410093 ATP6V0A2Q9Y487 856 aa15.59■□□□□ 0.09
LIMS1-205ENST00000410093 DDX60LQ5H9U9 1706 aaKnown RBP15.59■□□□□ 0.09
LIMS1-205ENST00000410093 BTBD18B2RXH4 712 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 NEMFO60524 1076 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 GALNT17Q6IS24 598 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.09
LIMS1-205ENST00000410093 TBC1D16Q8TBP0 767 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 CNKSR1Q969H4 720 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 RTFDC1Q9BY42 306 aaPredicted RBP15.58■□□□□ 0.09
LIMS1-205ENST00000410093 TRIM5Q9C035 493 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 MKNK2Q9HBH9 465 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.09
LIMS1-205ENST00000410093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.58■□□□□ 0.09
LIMS1-205ENST00000410093 GAKO14976 1311 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 ANKRD31Q8N7Z5 1873 aa15.58■□□□□ 0.09
LIMS1-205ENST00000410093 CYP2D7A0A087X1C5 515 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
LIMS1-205ENST00000410093 WDHD1O75717 1129 aaPredicted RBP15.58■□□□□ 0.08
LIMS1-205ENST00000410093 SMARCA1P28370 1054 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 GUCY1A2P33402 732 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 ZNF75DP51815 510 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 PLCB2Q00722 1185 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 C9orf131Q5VYM1 1079 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 PIBF1Q8WXW3 757 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 FERMT2Q96AC1 680 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 MASTLQ96GX5 879 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 TUBE1Q9UJT0 475 aa15.58■□□□□ 0.08
LIMS1-205ENST00000410093 BRCA1P38398 1863 aaKnown RBP15.57■□□□□ 0.08
LIMS1-205ENST00000410093 MYH1P12882 1939 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 TRIM75PA6NK02 468 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 C1QTNF8P60827 252 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 PKN1Q16512 942 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 CT47A1Q5JQC4 288 aaPredicted RBP15.57■□□□□ 0.08
LIMS1-205ENST00000410093 SHC4Q6S5L8 630 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 SH3RF3Q8TEJ3 882 aaPredicted RBP15.57■□□□□ 0.08
LIMS1-205ENST00000410093 RNF181Q9P0P0 153 aa15.57■□□□□ 0.08
LIMS1-205ENST00000410093 KCNH3Q9ULD8 1083 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms