RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZFYP08048 801 aaPredicted RBP21.28■■□□□ 1
LSM5-204ENST00000409909 IRX3P78415 501 aaPredicted RBP21.28■■□□□ 1
LSM5-204ENST00000409909 POTEEQ6S8J3 1075 aa21.28■■□□□ 1
LSM5-204ENST00000409909 C12orf42Q96LP6 360 aa21.28■■□□□ 1
LSM5-204ENST00000409909 FEZ1Q99689 392 aa21.28■■□□□ 1
LSM5-204ENST00000409909 KIAA1683Q9H0B3 1180 aa21.28■■□□□ 1
LSM5-204ENST00000409909 SWAP70Q9UH65 585 aa21.28■■□□□ 1
LSM5-204ENST00000409909 TAOK2Q9UL54 1235 aa21.28■■□□□ 1
LSM5-204ENST00000409909 PDE4DIPQ5VU43 2346 aa21.28■■□□□ 1
LSM5-204ENST00000409909 A0A1W2PRG0 241 aa21.27■■□□□ 1
LSM5-204ENST00000409909 M0R2C6 588 aa21.27■■□□□ 1
LSM5-204ENST00000409909 MPHOSPH10O00566 681 aaKnown RBP21.27■■□□□ 1
LSM5-204ENST00000409909 TNPO2O14787 897 aaKnown RBP21.27■■□□□ 1
LSM5-204ENST00000409909 CDK8P49336 464 aa21.27■■□□□ 1
LSM5-204ENST00000409909 HERVK_113P62684 666 aa21.27■■□□□ 1
LSM5-204ENST00000409909 TXNRD2Q9NNW7 524 aa21.27■■□□□ 1
LSM5-204ENST00000409909 MORF4L1Q9UBU8 362 aa21.27■■□□□ 1
LSM5-204ENST00000409909 RBBP6Q7Z6E9 1792 aaKnown RBP21.27■■□□□ 1
LSM5-204ENST00000409909 AKR1B1P15121 316 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 EN2P19622 333 aaPredicted RBP21.26■□□□□ 0.99
LSM5-204ENST00000409909 GRK4P32298 578 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 FLT3LGP49771 235 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 USP14P54578 494 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 C16orf86Q6ZW13 317 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 SIAH1Q8IUQ4 282 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 DDRGK1Q96HY6 314 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 RBPJLQ9UBG7 517 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
LSM5-204ENST00000409909 STAP2Q9UGK3 403 aa21.26■□□□□ 0.99
LSM5-204ENST00000409909 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
LSM5-204ENST00000409909 MYH8P13535 1937 aa21.25■□□□□ 0.99
LSM5-204ENST00000409909 GPAA1O43292 621 aa21.25■□□□□ 0.99
LSM5-204ENST00000409909 IGHDP01880 384 aa21.25■□□□□ 0.99
LSM5-204ENST00000409909 TMEM179Q6ZVK1 233 aa21.25■□□□□ 0.99
LSM5-204ENST00000409909 AMOTL1Q8IY63 956 aa21.25■□□□□ 0.99
LSM5-204ENST00000409909 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
LSM5-204ENST00000409909 TMEM106CQ9BVX2 250 aa21.25■□□□□ 0.99
LSM5-204ENST00000409909 USP17L15C9J2P7 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L13C9JLJ4 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L11C9JVI0 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L18D6R9N7 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L22D6RA61 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L17D6RBQ6 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L19D6RCP7 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L20D6RJB6 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 VCAM1P19320 739 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 PDE1AP54750 535 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 USP17L24Q0WX57 530 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 MTFR1Q15390 333 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 SBK1Q52WX2 424 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 GIMAP6Q6P9H5 292 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 CLEC10AQ8IUN9 316 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 SMC5Q8IY18 1101 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 FSD1Q9BTV5 496 aa21.24■□□□□ 0.99
LSM5-204ENST00000409909 RWDD1Q9H446 243 aaPredicted RBP21.24■□□□□ 0.99
LSM5-204ENST00000409909 EPB41L4AQ9HCS5 686 aaPredicted RBP21.24■□□□□ 0.99
LSM5-204ENST00000409909 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
LSM5-204ENST00000409909 Q3C1V9 767 aa21.23■□□□□ 0.99
LSM5-204ENST00000409909 ZMYM1Q5SVZ6 1142 aa21.23■□□□□ 0.99
LSM5-204ENST00000409909 CATSPERGQ6ZRH7 1159 aa21.23■□□□□ 0.99
LSM5-204ENST00000409909 GPRC5AQ8NFJ5 357 aa21.23■□□□□ 0.99
LSM5-204ENST00000409909 COA7Q96BR5 231 aa21.23■□□□□ 0.99
LSM5-204ENST00000409909 ARPP21Q9UBL0 812 aaPredicted RBP21.23■□□□□ 0.99
LSM5-204ENST00000409909 ADCY3O60266 1144 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 ELNP15502 786 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 IRF5Q13568 498 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 KIAA1755Q5JYT7 1200 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 SLAIN1Q8ND83 568 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 CCDC17Q96LX7 622 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 LNPKQ9C0E8 428 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 GJD2Q9UKL4 321 aa21.22■□□□□ 0.99
LSM5-204ENST00000409909 GNAT2P19087 354 aa21.21■□□□□ 0.99
LSM5-204ENST00000409909 B4GALNT3Q6L9W6 998 aa21.21■□□□□ 0.99
LSM5-204ENST00000409909 RPAP3Q9H6T3 665 aaPredicted RBP21.21■□□□□ 0.99
LSM5-204ENST00000409909 BIN2Q9UBW5 565 aaPredicted RBP21.21■□□□□ 0.99
LSM5-204ENST00000409909 MINDY4BA8MYZ0 360 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 PATL2C9JE40 543 aaKnown RBP21.2■□□□□ 0.98
LSM5-204ENST00000409909 CNMDO75829 334 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 ERVK-9P63128 1117 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 ERVK-24P63145 666 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 STK11IPQ8N1F8 1099 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 PXYLP1Q8TE99 480 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 PAGR1Q9BTK6 254 aa21.2■□□□□ 0.98
LSM5-204ENST00000409909 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.2■□□□□ 0.98
LSM5-204ENST00000409909 APPP05067 770 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 CCL5P13501 91 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 ICA1Q05084 483 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 IFNL3Q8IZI9 196 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 GTF3C2Q8WUA4 911 aaPredicted RBP21.19■□□□□ 0.98
LSM5-204ENST00000409909 EVI5LQ96CN4 794 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 PORCNQ9H237 461 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 PLXNB2O15031 1838 aa21.19■□□□□ 0.98
LSM5-204ENST00000409909 RASA1P20936 1047 aa21.18■□□□□ 0.98
LSM5-204ENST00000409909 TDO2P48775 406 aa21.18■□□□□ 0.98
LSM5-204ENST00000409909 NUCB1Q02818 461 aa21.18■□□□□ 0.98
LSM5-204ENST00000409909 RABGAP1Q9Y3P9 1069 aa21.18■□□□□ 0.98
LSM5-204ENST00000409909 ROBO3Q96MS0 1386 aa21.18■□□□□ 0.98
LSM5-204ENST00000409909 SPDYE16A6NNV3 312 aaPredicted RBP21.17■□□□□ 0.98
LSM5-204ENST00000409909 FOXP2O15409 715 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms