RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 PTPRFP10586 1907 aa20.43■□□□□ 0.86
PDE6D-202ENST00000409772 HIP1O00291 1037 aa20.43■□□□□ 0.86
PDE6D-202ENST00000409772 MFAP1P55081 439 aaKnown RBP20.43■□□□□ 0.86
PDE6D-202ENST00000409772 MCMDC2Q4G0Z9 681 aa20.43■□□□□ 0.86
PDE6D-202ENST00000409772 GTF3C2Q8WUA4 911 aaPredicted RBP20.43■□□□□ 0.86
PDE6D-202ENST00000409772 C12orf42Q96LP6 360 aa20.43■□□□□ 0.86
PDE6D-202ENST00000409772 NAPBQ9H115 298 aa20.43■□□□□ 0.86
PDE6D-202ENST00000409772 ASCC2Q9H1I8 757 aaPredicted RBP20.43■□□□□ 0.86
PDE6D-202ENST00000409772 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
PDE6D-202ENST00000409772 DDX60LQ5H9U9 1706 aaKnown RBP20.42■□□□□ 0.86
PDE6D-202ENST00000409772 FMNL1O95466 1100 aaPredicted RBP20.42■□□□□ 0.86
PDE6D-202ENST00000409772 PSMC4P43686 418 aa20.42■□□□□ 0.86
PDE6D-202ENST00000409772 FCGRTP55899 365 aa20.42■□□□□ 0.86
PDE6D-202ENST00000409772 SEPT2Q15019 361 aa20.42■□□□□ 0.86
PDE6D-202ENST00000409772 NBPF11Q86T75 865 aa20.42■□□□□ 0.86
PDE6D-202ENST00000409772 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
PDE6D-202ENST00000409772 KANSL2Q9H9L4 492 aa20.42■□□□□ 0.86
PDE6D-202ENST00000409772 EMILIN3Q9NT22 766 aa20.42■□□□□ 0.86
PDE6D-202ENST00000409772 BAZ2AQ9UIF9 1905 aaKnown RBP20.41■□□□□ 0.86
PDE6D-202ENST00000409772 CYP2D7A0A087X1C5 515 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L15C9J2P7 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L13C9JLJ4 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L11C9JVI0 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L18D6R9N7 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L22D6RA61 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L17D6RBQ6 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L19D6RCP7 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L20D6RJB6 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 PDE4BQ07343 736 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 USP17L24Q0WX57 530 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 FAM110CQ1W6H9 321 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 SHROOM1Q2M3G4 852 aaPredicted RBP20.41■□□□□ 0.86
PDE6D-202ENST00000409772 ZNF444Q8N0Y2 327 aaPredicted RBP20.41■□□□□ 0.86
PDE6D-202ENST00000409772 SLC44A5Q8NCS7 719 aa20.41■□□□□ 0.86
PDE6D-202ENST00000409772 GUCY1A2P33402 732 aa20.4■□□□□ 0.86
PDE6D-202ENST00000409772 EVX2Q03828 476 aa20.39■□□□□ 0.85
PDE6D-202ENST00000409772 ICA1Q05084 483 aa20.39■□□□□ 0.85
PDE6D-202ENST00000409772 ANKRD13CQ8N6S4 541 aa20.39■□□□□ 0.85
PDE6D-202ENST00000409772 LPAR1Q92633 364 aa20.39■□□□□ 0.85
PDE6D-202ENST00000409772 ROBO3Q96MS0 1386 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 AKR1B1P15121 316 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 SDSP20132 328 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 ALX1Q15699 326 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 ZYXQ15942 572 aaKnown RBP20.38■□□□□ 0.85
PDE6D-202ENST00000409772 ACER1Q8TDN7 264 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 COA7Q96BR5 231 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 P2RX7Q99572 595 aaKnown RBP20.38■□□□□ 0.85
PDE6D-202ENST00000409772 EPB41L4AQ9HCS5 686 aaPredicted RBP20.38■□□□□ 0.85
PDE6D-202ENST00000409772 HOXC10Q9NYD6 342 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 SRRDQ9UH36 339 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 TMX2Q9Y320 296 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 LOC285556D6RIA3 1793 aa20.38■□□□□ 0.85
PDE6D-202ENST00000409772 HERVK_113P62684 666 aa20.37■□□□□ 0.85
PDE6D-202ENST00000409772 PPP4R3BQ5MIZ7 849 aa20.37■□□□□ 0.85
PDE6D-202ENST00000409772 CATSPERGQ6ZRH7 1159 aa20.37■□□□□ 0.85
PDE6D-202ENST00000409772 TRIM47Q96LD4 638 aa20.37■□□□□ 0.85
PDE6D-202ENST00000409772 ARHGAP39Q9C0H5 1083 aa20.37■□□□□ 0.85
PDE6D-202ENST00000409772 DIAPH3Q9NSV4 1193 aa20.37■□□□□ 0.85
PDE6D-202ENST00000409772 MYH8P13535 1937 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 VCAM1P19320 739 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 PPARAQ07869 468 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 SLC9C1Q4G0N8 1177 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
PDE6D-202ENST00000409772 GPRC5AQ8NFJ5 357 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 RAET1EQ8TD07 263 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 FAM227BQ96M60 508 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 MORF4L1Q9UBU8 362 aa20.36■□□□□ 0.85
PDE6D-202ENST00000409772 TNPO2O14787 897 aaKnown RBP20.35■□□□□ 0.85
PDE6D-202ENST00000409772 RASA1P20936 1047 aa20.35■□□□□ 0.85
PDE6D-202ENST00000409772 NMIQ13287 307 aaPredicted RBP20.35■□□□□ 0.85
PDE6D-202ENST00000409772 CCDC129Q6ZRS4 1044 aa20.35■□□□□ 0.85
PDE6D-202ENST00000409772 GOPCQ9HD26 462 aa20.35■□□□□ 0.85
PDE6D-202ENST00000409772 MYPNQ86TC9 1320 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 A0A0D9SFI3 127 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 A0A1W2PRG0 241 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 EEF2P13639 858 aaKnown RBP20.34■□□□□ 0.85
PDE6D-202ENST00000409772 CCNA1P78396 465 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 ATP2B2Q01814 1243 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 COG2Q14746 738 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 STK11IPQ8N1F8 1099 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 VCPKMTQ9H867 229 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 NYAP2Q9P242 653 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 RABGAP1Q9Y3P9 1069 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 PTCH2Q9Y6C5 1203 aa20.34■□□□□ 0.85
PDE6D-202ENST00000409772 CCDC171Q6TFL3 1326 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 SMIM22K7EJ46 135 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 TSPY3P0CV98 308 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 TSPY8P0CW00 308 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 RGS19P49795 217 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 CAP1Q01518 475 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 LBX2Q6XYB7 198 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 SIAH1Q8IUQ4 282 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 ARMC5Q96C12 935 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 RPAP3Q9H6T3 665 aaPredicted RBP20.33■□□□□ 0.85
PDE6D-202ENST00000409772 ANAPC4Q9UJX5 808 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 SYNPO2Q9UMS6 1093 aa20.33■□□□□ 0.85
PDE6D-202ENST00000409772 FGAP02671 866 aa20.32■□□□□ 0.84
PDE6D-202ENST00000409772 HSPD1P10809 573 aaKnown RBP20.32■□□□□ 0.84
PDE6D-202ENST00000409772 PDE4AP27815 886 aa20.32■□□□□ 0.84
PDE6D-202ENST00000409772 CTGFP29279 349 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms