RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 HACL1Q9UJ83 578 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 EPHX2P34913 555 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 CCDC178Q5BJE1 867 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 FAM47AQ5JRC9 791 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 NUP133Q8WUM0 1156 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 LEO1Q8WVC0 666 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-206ENST00000409754 ZNF396Q96N95 335 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-206ENST00000409754 MRIQ9BWK5 157 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
LIMS2-206ENST00000409754 POLR2AP24928 1970 aaKnown RBP16.36■□□□□ 0.21
LIMS2-206ENST00000409754 F8W031 263 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-206ENST00000409754 PLCD1P51178 756 aa16.36■□□□□ 0.21
LIMS2-206ENST00000409754 TRIM22Q8IYM9 498 aa16.36■□□□□ 0.21
LIMS2-206ENST00000409754 DYNLL2Q96FJ2 89 aa16.36■□□□□ 0.21
LIMS2-206ENST00000409754 ZBED3Q96IU2 234 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-206ENST00000409754 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
LIMS2-206ENST00000409754 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
LIMS2-206ENST00000409754 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
LIMS2-206ENST00000409754 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
LIMS2-206ENST00000409754 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
LIMS2-206ENST00000409754 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 MYO3BQ8WXR4 1341 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 TFAP4Q01664 338 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 TROAPQ12815 778 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 TBC1D10BQ4KMP7 808 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-206ENST00000409754 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 C16orf86Q6ZW13 317 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 NBPF11Q86T75 865 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 DGKHQ86XP1 1220 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 CRACR2BQ8N4Y2 399 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-206ENST00000409754 ANKS1AQ92625 1134 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 TEKT1Q969V4 418 aa16.35■□□□□ 0.21
LIMS2-206ENST00000409754 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 MRE11P49959 708 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 KIF23Q02241 960 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-206ENST00000409754 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 ZNF444Q8N0Y2 327 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-206ENST00000409754 ADARB2Q9NS39 739 aaKnown RBP16.34■□□□□ 0.21
LIMS2-206ENST00000409754 NMT2O60551 498 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 DEXIO95424 95 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
LIMS2-206ENST00000409754 TRIM29Q14134 588 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 CCDC183Q5T5S1 534 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 KRT40Q6A162 431 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 AIFM3Q96NN9 605 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-206ENST00000409754 RCOR1Q9UKL0 485 aa16.34■□□□□ 0.21
LIMS2-206ENST00000409754 RASA1P20936 1047 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 CDK8P49336 464 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 RCSD1Q6JBY9 416 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 APOBEC3HQ6NTF7 200 aaKnown RBP16.33■□□□□ 0.2
LIMS2-206ENST00000409754 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 MYOZ2Q9NPC6 264 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 IL17RBQ9NRM6 502 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 USP40Q9NVE5 1235 aa16.33■□□□□ 0.2
LIMS2-206ENST00000409754 MYH1P12882 1939 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 WDHD1O75717 1129 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-206ENST00000409754 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-206ENST00000409754 CRKP46108 304 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 KIF4BQ2VIQ3 1234 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 NBPF9Q3BBW0 867 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 SLC44A5Q8NCS7 719 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 USP28Q96RU2 1077 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 GRPEL1Q9HAV7 217 aa16.32■□□□□ 0.2
LIMS2-206ENST00000409754 GOLGA6L4A6NEF3 574 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 LETM1O95202 739 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-206ENST00000409754 FUT2Q10981 343 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 RBM26Q5T8P6 1007 aaKnown RBP16.31■□□□□ 0.2
LIMS2-206ENST00000409754 MYSM1Q5VVJ2 828 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 LRSAM1Q6UWE0 723 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 DLK2Q6UY11 383 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
LIMS2-206ENST00000409754 KAT14Q9H8E8 782 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 CEP350Q5VT06 3117 aa16.31■□□□□ 0.2
LIMS2-206ENST00000409754 SYCE3A1L190 88 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 WNT10BO00744 389 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 GUCY1A2P33402 732 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 NEDD1Q8NHV4 660 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 PGAP2Q9UHJ9 254 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 H7C1D1 291 aa16.3■□□□□ 0.2
LIMS2-206ENST00000409754 XRCC6P12956 609 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIMS2-206ENST00000409754 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms