RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TEKT1Q969V4 418 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 RILPQ96NA2 401 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 TXNDC9O14530 226 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 PDE8AO60658 829 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 KCNA6P17658 529 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 CALCOCO2Q13137 446 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 TRIM50Q86XT4 487 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 VPS18Q9P253 973 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 GYG1P46976 350 aa9.34□□□□□ -0.92
SCN9A-203ENST00000409672 PHLDB2Q86SQ0 1253 aa9.34□□□□□ -0.92
SCN9A-203ENST00000409672 ASIC3Q9UHC3 531 aa9.34□□□□□ -0.92
SCN9A-203ENST00000409672 INPP5FQ9Y2H2 1132 aa9.34□□□□□ -0.92
SCN9A-203ENST00000409672 MYBP10242 640 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 SKILP12757 684 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 ABCB4P21439 1286 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 SZRD1Q7Z422 152 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 XKR9Q5GH70 373 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 SLC7A5P2Q9GIP4 190 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 ZHX1Q9UKY1 873 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-203ENST00000409672 TNNQ9UQP3 1299 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 FIS1Q9Y3D6 152 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 NPATQ14207 1427 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 COBLO75128 1261 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 MYL3P08590 195 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 AK2P54819 239 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 MYSM1Q5VVJ2 828 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 VPS54Q9P1Q0 977 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 OTUD6AQ7L8S5 288 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 MIER3Q7Z3K6 550 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 NOX5Q96PH1 765 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 EXOC7Q9UPT5 735 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 KRT86O43790 486 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 TECP42680 631 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 TTBK2Q6IQ55 1244 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 ARHGEF2Q92974 986 aaKnown RBP9.33□□□□□ -0.92
SCN9A-203ENST00000409672 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-203ENST00000409672 PLEKHH1Q9ULM0 1364 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 ZBTB7AO95365 584 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 TFAP4Q01664 338 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 BRD3Q15059 726 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 CERKLQ49MI3 558 aaPredicted RBP9.33□□□□□ -0.92
SCN9A-203ENST00000409672 ZNF365Q70YC5 407 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 WDR66Q8TBY9 1149 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 ESYT1Q9BSJ8 1104 aa9.33□□□□□ -0.92
SCN9A-203ENST00000409672 KIF2AO00139 706 aaPredicted RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 TSPYL6Q8N831 410 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 HOOK2Q96ED9 719 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 ADCY7P51828 1080 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 LLGL1Q15334 1064 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 RSAD2Q8WXG1 361 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 MTRF1LQ9UGC7 380 aaKnown RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 KCTD1Q719H9 257 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 DNAJC10Q8IXB1 793 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 C7orf31Q8N865 590 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 CCPG1Q9ULG6 757 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 ATF7P17544 494 aaPredicted RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 PDE1AP54750 535 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 KLHL7Q8IXQ5 586 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 HAUS2Q9NVX0 235 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 CCDC171Q6TFL3 1326 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 BCAMP50895 628 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 EEF2KMTQ96G04 330 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 PSDA5PKW4 1024 aaPredicted RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 GPAA1O43292 621 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 MCUQ8NE86 351 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 TRIM56Q9BRZ2 755 aaKnown RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 TBC1D8BQ0IIM8 1120 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 CCDC186Q7Z3E2 898 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 CTAGE3PQ8IX95 158 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 RSRC2Q7L4I2 434 aaKnown RBP9.32□□□□□ -0.92
SCN9A-203ENST00000409672 CCDC127Q96BQ5 260 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.32□□□□□ -0.922e-6■■■■□ 22.7
SCN9A-203ENST00000409672 KDRP35968 1356 aa9.32□□□□□ -0.92
SCN9A-203ENST00000409672 CTTNBP2NLQ9P2B4 639 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 IFNB1P01574 187 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 GDAP1Q8TB36 358 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ADPGKQ9BRR6 497 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ZNF532Q9HCE3 1301 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 PIK3CAP42336 1068 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 KRT83P78385 493 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 INTS8Q75QN2 995 aaKnown RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 GPR101Q96P66 508 aaPredicted RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 BMP15O95972 392 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 OSBPP22059 807 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 ZNF790Q6PG37 636 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 FEZ2Q9UHY8 353 aaPredicted RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 HOXC9P31274 260 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 MUM1L1Q5H9M0 696 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 EYA1Q99502 592 aa9.31□□□□□ -0.92
SCN9A-203ENST00000409672 POLA1P09884 1462 aaPredicted RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 GPR161Q8N6U8 529 aaKnown RBP9.31□□□□□ -0.92
SCN9A-203ENST00000409672 N4BP2L2Q92802 583 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms