RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 PIGSQ96S52 555 aa13□□□□□ -0.33
SNX13-202ENST00000409604 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
SNX13-202ENST00000409604 MRE11P49959 708 aa13□□□□□ -0.33
SNX13-202ENST00000409604 STIM1Q13586 685 aa13□□□□□ -0.33
SNX13-202ENST00000409604 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
SNX13-202ENST00000409604 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
SNX13-202ENST00000409604 CEP95Q96GE4 821 aa13□□□□□ -0.33
SNX13-202ENST00000409604 IPO7O95373 1038 aaKnown RBP12.99□□□□□ -0.33
SNX13-202ENST00000409604 HOXA13P31271 388 aaPredicted RBP12.99□□□□□ -0.33
SNX13-202ENST00000409604 UBE2HP62256 183 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 PRMT6Q96LA8 375 aaPredicted RBP12.99□□□□□ -0.33
SNX13-202ENST00000409604 TESPA1A2RU30 521 aaPredicted RBP12.99□□□□□ -0.33
SNX13-202ENST00000409604 AKR1B1P15121 316 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 ADGRA1Q86SQ6 560 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 SEPT11Q9NVA2 429 aaKnown RBP12.99□□□□□ -0.33
SNX13-202ENST00000409604 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 USP28Q96RU2 1077 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 TM6SF1Q9BZW5 370 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 SH2D4AQ9H788 454 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
SNX13-202ENST00000409604 POLR1AO95602 1720 aaPredicted RBP12.99□□□□□ -0.33
SNX13-202ENST00000409604 ZNF165P49910 485 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 ASIC1P78348 528 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 MRPS27Q92552 414 aaKnown RBP12.98□□□□□ -0.33
SNX13-202ENST00000409604 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 TBC1D7Q9P0N9 293 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 IVNS1ABPQ9Y6Y0 642 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 NBPF9Q3BBW0 867 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 DTHD1Q6ZMT9 781 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 RBM28Q9NW13 759 aaKnown RBP12.98□□□□□ -0.33
SNX13-202ENST00000409604 ROBO1Q9Y6N7 1651 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 DCAF15Q66K64 600 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
SNX13-202ENST00000409604 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 ZNF609O15014 1411 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 CDC42EP5Q6NZY7 148 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 REXO1Q8N1G1 1221 aaKnown RBP12.98□□□□□ -0.33
SNX13-202ENST00000409604 NFAT5O94916 1531 aa12.98□□□□□ -0.33
SNX13-202ENST00000409604 TOP1P11387 765 aaKnown RBP12.97□□□□□ -0.33
SNX13-202ENST00000409604 HARSP12081 509 aaKnown RBP12.97□□□□□ -0.33
SNX13-202ENST00000409604 UBE2SQ16763 222 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 KIF4BQ2VIQ3 1234 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 NCAPH2Q6IBW4 605 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 PDCL3Q9H2J4 239 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 PDE4DIPQ5VU43 2346 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 POLR2DO15514 142 aaKnown RBP12.97□□□□□ -0.33
SNX13-202ENST00000409604 C9orf131Q5VYM1 1079 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 DYMQ7RTS9 669 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 ANKRD35Q8N283 1001 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 SMARCE1Q969G3 411 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 POLD4Q9HCU8 107 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
SNX13-202ENST00000409604 UTYO14607 1347 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 ADCY7P51828 1080 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 CYP4A11Q02928 519 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 CXCL9Q07325 125 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 FILIP1LQ4L180 1135 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 PRR16Q569H4 304 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 ANO1Q5XXA6 986 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 EPB41L4AQ9HCS5 686 aaPredicted RBP12.97□□□□□ -0.33
SNX13-202ENST00000409604 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
SNX13-202ENST00000409604 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 TTLL1O95922 423 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 ZSCAN23Q3MJ62 389 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 RRAGBQ5VZM2 374 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 ENAHQ8N8S7 591 aaPredicted RBP12.96□□□□□ -0.33
SNX13-202ENST00000409604 TMX1Q9H3N1 280 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 UBE2Q2LH0YL09 131 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 COBLO75128 1261 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 ZBED4O75132 1171 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 TTC38Q5R3I4 469 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 KCNG4Q8TDN1 519 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 TMEM47Q9BQJ4 181 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 TCHPQ9BT92 498 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 GOPCQ9HD26 462 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 CCPG1Q9ULG6 757 aa12.96□□□□□ -0.33
SNX13-202ENST00000409604 PFKFB2O60825 505 aa12.96□□□□□ -0.34
SNX13-202ENST00000409604 KRT79Q5XKE5 535 aa12.96□□□□□ -0.34
SNX13-202ENST00000409604 NLGN2Q8NFZ4 835 aa12.96□□□□□ -0.34
SNX13-202ENST00000409604 MTMR6Q9Y217 621 aa12.96□□□□□ -0.34
SNX13-202ENST00000409604 EEF2P13639 858 aaKnown RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 PRKCSHP14314 528 aaPredicted RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 CNGA1P29973 690 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
SNX13-202ENST00000409604 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 TTBK2Q6IQ55 1244 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 STAG2Q8N3U4 1231 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 SLC16A10Q8TF71 515 aa12.95□□□□□ -0.34
SNX13-202ENST00000409604 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNX13-202ENST00000409604 SCG2P13521 617 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms