RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 NT5C1AQ9BXI3 368 aa6.92□□□□□ -1.3
PMS1-203ENST00000409593 OAS3Q9Y6K5 1087 aaKnown RBP6.92□□□□□ -1.3
PMS1-203ENST00000409593 CNTNAP4Q9C0A0 1308 aa6.91□□□□□ -1.3
PMS1-203ENST00000409593 DNAJA2O60884 412 aa6.91□□□□□ -1.3
PMS1-203ENST00000409593 CD96P40200 585 aa6.91□□□□□ -1.3
PMS1-203ENST00000409593 ETV3P41162 512 aa6.91□□□□□ -1.3
PMS1-203ENST00000409593 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
PMS1-203ENST00000409593 SPACA3Q8IXA5 215 aa6.91□□□□□ -1.3
PMS1-203ENST00000409593 EAF1Q96JC9 268 aaPredicted RBP6.91□□□□□ -1.3
PMS1-203ENST00000409593 DDX41Q9UJV9 622 aaKnown RBP6.91□□□□□ -1.3
PMS1-203ENST00000409593 HDLBPQ00341 1268 aaKnown RBP6.9□□□□□ -1.3
PMS1-203ENST00000409593 PRKCQQ04759 706 aa6.9□□□□□ -1.3
PMS1-203ENST00000409593 NKPD1Q17RQ9 610 aa6.9□□□□□ -1.3
PMS1-203ENST00000409593 CDKAL1Q5VV42 579 aa6.9□□□□□ -1.3
PMS1-203ENST00000409593 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
PMS1-203ENST00000409593 NT5DC4Q86YG4 428 aa6.9□□□□□ -1.3
PMS1-203ENST00000409593 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
PMS1-203ENST00000409593 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 ZNF165P49910 485 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 CLCQ05315 142 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 METTL16Q86W50 562 aaKnown RBP6.9□□□□□ -1.31
PMS1-203ENST00000409593 DNAJB8Q8NHS0 232 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 TNKS2Q9H2K2 1166 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 PAK6Q9NQU5 681 aaPredicted RBP6.9□□□□□ -1.31
PMS1-203ENST00000409593 VAV3Q9UKW4 847 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.31
PMS1-203ENST00000409593 ZNF865P0CJ78 1059 aaPredicted RBP6.89□□□□□ -1.31
PMS1-203ENST00000409593 RBM25P49756 843 aaKnown RBP6.89□□□□□ -1.31
PMS1-203ENST00000409593 CLCN7P51798 805 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 PLCL1Q15111 1095 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 ARSHQ5FYA8 562 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 OVOS1Q6IE37 1185 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 SPRED2Q7Z698 418 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 ZNF654Q8IZM8 581 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 ABI1Q8IZP0 508 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 AGBL5Q8NDL9 886 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 BAHD1Q8TBE0 780 aaPredicted RBP6.89□□□□□ -1.31
PMS1-203ENST00000409593 COX4I2Q96KJ9 171 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 CCDC74BQ96LY2 380 aa6.89□□□□□ -1.31
PMS1-203ENST00000409593 H3BS24 57 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 CD8BP10966 210 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 RAG1P15918 1043 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 KIR3DL1P43629 444 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 C22orf34Q6ZV56 151 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 SLITRK4Q8IW52 837 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 KIF2CQ99661 725 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 GMIPQ9P107 970 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 SNX11Q9Y5W9 270 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 CAPN6Q9Y6Q1 641 aa6.88□□□□□ -1.31
PMS1-203ENST00000409593 ATE1O95260 518 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 GBP1P32455 592 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 IKZF1Q13422 519 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 WFDC3Q8IUB2 231 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 REXO1Q8N1G1 1221 aaKnown RBP6.87□□□□□ -1.31
PMS1-203ENST00000409593 ASB11Q8WXH4 323 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 HSPA12BQ96MM6 686 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 SLC22A31A6NKX4 558 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 IRAK1P51617 712 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 PAK2Q13177 524 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 ANGEL2Q5VTE6 544 aaKnown RBP6.87□□□□□ -1.31
PMS1-203ENST00000409593 FERD3LQ96RJ6 166 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 EHMT1Q9H9B1 1298 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 GOLGA2P5Q9HBQ8 144 aa6.87□□□□□ -1.31
PMS1-203ENST00000409593 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.87□□□□□ -1.31
PMS1-203ENST00000409593 PITPNM2Q9BZ72 1349 aa6.86□□□□□ -1.31
PMS1-203ENST00000409593 TNK2Q07912 1038 aa6.86□□□□□ -1.31
PMS1-203ENST00000409593 FBXW10Q5XX13 1052 aa6.86□□□□□ -1.31
PMS1-203ENST00000409593 ANTXR1Q9H6X2 564 aa6.86□□□□□ -1.31
PMS1-203ENST00000409593 POLR2BP30876 1174 aaKnown RBP6.85□□□□□ -1.31
PMS1-203ENST00000409593 NLRC3Q7RTR2 1065 aa6.85□□□□□ -1.31
PMS1-203ENST00000409593 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
PMS1-203ENST00000409593 TMEM40Q8WWA1 233 aa6.85□□□□□ -1.31
PMS1-203ENST00000409593 KREMEN1Q96MU8 473 aa6.85□□□□□ -1.31
PMS1-203ENST00000409593 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 Q96M66 194 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 ATP13A1Q9HD20 1204 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 SEMA3GQ9NS98 782 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 ZSWIM5Q9P217 1185 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 PPT2Q9UMR5 302 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 ST14Q9Y5Y6 855 aa6.84□□□□□ -1.31
PMS1-203ENST00000409593 RGS13O14921 159 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 FUT4P22083 530 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 ZP2Q05996 745 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 LRRFIP1Q32MZ4 808 aaKnown RBP6.84□□□□□ -1.32
PMS1-203ENST00000409593 LCE1DQ5T752 114 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 UBE2FQ969M7 185 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 GPRASP2Q96D09 838 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 CCSER2Q9H7U1 834 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 KCNH3Q9ULD8 1083 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.32
PMS1-203ENST00000409593 FAM86C2PA6NEL3 165 aa6.83□□□□□ -1.32
PMS1-203ENST00000409593 LRRN2O75325 713 aa6.83□□□□□ -1.32
PMS1-203ENST00000409593 UBOX5O94941 541 aa6.83□□□□□ -1.32
PMS1-203ENST00000409593 ZNF792Q3KQV3 632 aa6.83□□□□□ -1.32
PMS1-203ENST00000409593 CDCP2Q5VXM1 449 aa6.83□□□□□ -1.32
PMS1-203ENST00000409593 DTWD2Q8NBA8 298 aa6.83□□□□□ -1.32
PMS1-203ENST00000409593 PIWIL2Q8TC59 973 aaKnown RBP6.83□□□□□ -1.32
PMS1-203ENST00000409593 PI4K2BQ8TCG2 481 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms