RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 USP17L18D6R9N7 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L22D6RA61 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L17D6RBQ6 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L19D6RCP7 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L20D6RJB6 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 PTPREP23469 700 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 ZAP70P43403 619 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 CCNA1P78396 465 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 USP17L24Q0WX57 530 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 MFSD14CQ5VZR4 134 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 TATDN1Q6P1N9 297 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 ATF7IPQ6VMQ6 1270 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 CATSPERGQ6ZRH7 1159 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 ZNF512BQ96KM6 892 aaPredicted RBP20.69■□□□□ 0.9
SCRN1-203ENST00000409570 GUCD1Q96NT3 240 aa20.69■□□□□ 0.9
SCRN1-203ENST00000409570 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
SCRN1-203ENST00000409570 EYSQ5T1H1 3165 aa20.68■□□□□ 0.9
SCRN1-203ENST00000409570 SLC15A5A6NIM6 579 aa20.68■□□□□ 0.9
SCRN1-203ENST00000409570 IGSF3O75054 1194 aa20.68■□□□□ 0.9
SCRN1-203ENST00000409570 GLRX3O76003 335 aaKnown RBP20.68■□□□□ 0.9
SCRN1-203ENST00000409570 POLA2Q14181 598 aa20.68■□□□□ 0.9
SCRN1-203ENST00000409570 FEZ1Q99689 392 aa20.68■□□□□ 0.9
SCRN1-203ENST00000409570 DDX20Q9UHI6 824 aaKnown RBP20.68■□□□□ 0.9
SCRN1-203ENST00000409570 ZNFX1Q9P2E3 1918 aaKnown RBP20.68■□□□□ 0.9
SCRN1-203ENST00000409570 HOXC6P09630 235 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 CYP7A1P22680 504 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 WDR78Q5VTH9 848 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 LBX2Q6XYB7 198 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 NPLOC4Q8TAT6 608 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 LPAR1Q92633 364 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 LBHD1Q9BQE6 289 aaPredicted RBP20.67■□□□□ 0.9
SCRN1-203ENST00000409570 BTBD7Q9P203 1132 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 ZNF236Q9UL36 1845 aa20.67■□□□□ 0.9
SCRN1-203ENST00000409570 SMCHD1A6NHR9 2005 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 IPO8O15397 1037 aaKnown RBP20.66■□□□□ 0.9
SCRN1-203ENST00000409570 IGHA2P01877 340 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 VCAM1P19320 739 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 ATN1P54259 1190 aaPredicted RBP20.66■□□□□ 0.9
SCRN1-203ENST00000409570 GRB14Q14449 540 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCRN1-203ENST00000409570 TRPV1Q8NER1 839 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 ACER1Q8TDN7 264 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 KIAA1683Q9H0B3 1180 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 NAV1Q8NEY1 1877 aa20.66■□□□□ 0.9
SCRN1-203ENST00000409570 VCANP13611 3396 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 MSCO60682 206 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 CNGA1P29973 690 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 USP14P54578 494 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 ATP2B2Q01814 1243 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 MIGA1Q8NAN2 632 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 SSH3Q8TE77 659 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 EHD4Q9H223 541 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 SERPINB13Q9UIV8 391 aa20.65■□□□□ 0.9
SCRN1-203ENST00000409570 DBNLQ9UJU6 430 aaKnown RBP20.65■□□□□ 0.9
SCRN1-203ENST00000409570 SPDYE16A6NNV3 312 aaPredicted RBP20.64■□□□□ 0.89
SCRN1-203ENST00000409570 DNM1LO00429 736 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 CYP2C19P33261 490 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 USP5P45974 858 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 OS9Q13438 667 aaPredicted RBP20.64■□□□□ 0.89
SCRN1-203ENST00000409570 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 FAM161BQ96MY7 647 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 IVNS1ABPQ9Y6Y0 642 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 MYH8P13535 1937 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 A0A0G2JMZ2 1700 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 PRUNE2Q8WUY3 3088 aa20.64■□□□□ 0.89
SCRN1-203ENST00000409570 BCAR3O75815 825 aa20.63■□□□□ 0.89
SCRN1-203ENST00000409570 CYBAP13498 195 aa20.63■□□□□ 0.89
SCRN1-203ENST00000409570 RTP1P59025 263 aa20.63■□□□□ 0.89
SCRN1-203ENST00000409570 ATP8B2P98198 1209 aa20.63■□□□□ 0.89
SCRN1-203ENST00000409570 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
SCRN1-203ENST00000409570 CERKLQ49MI3 558 aaPredicted RBP20.63■□□□□ 0.89
SCRN1-203ENST00000409570 FRAT1Q92837 279 aaPredicted RBP20.63■□□□□ 0.89
SCRN1-203ENST00000409570 TLR7Q9NYK1 1049 aaKnown RBP20.63■□□□□ 0.89
SCRN1-203ENST00000409570 PARP14Q460N5 1801 aa20.62■□□□□ 0.89
SCRN1-203ENST00000409570 SURF6O75683 361 aaKnown RBP20.62■□□□□ 0.89
SCRN1-203ENST00000409570 IDH1O75874 414 aaKnown RBP20.62■□□□□ 0.89
SCRN1-203ENST00000409570 GUCY1A2P33402 732 aa20.62■□□□□ 0.89
SCRN1-203ENST00000409570 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
SCRN1-203ENST00000409570 MAGEB6Q8N7X4 407 aa20.62■□□□□ 0.89
SCRN1-203ENST00000409570 RPAP3Q9H6T3 665 aaPredicted RBP20.62■□□□□ 0.89
SCRN1-203ENST00000409570 SHMT1P34896 483 aa20.61■□□□□ 0.89
SCRN1-203ENST00000409570 GJC2Q5T442 439 aaPredicted RBP20.61■□□□□ 0.89
SCRN1-203ENST00000409570 TTC6Q86TZ1 520 aa20.61■□□□□ 0.89
SCRN1-203ENST00000409570 TMEM57Q8N5G2 664 aa20.61■□□□□ 0.89
SCRN1-203ENST00000409570 CCDC8Q9H0W5 538 aaPredicted RBP20.61■□□□□ 0.89
SCRN1-203ENST00000409570 PRKAG2Q9UGJ0 569 aa20.61■□□□□ 0.89
SCRN1-203ENST00000409570 CDH23Q9H251 3354 aa20.6■□□□□ 0.89
SCRN1-203ENST00000409570 PLCD1P51178 756 aa20.6■□□□□ 0.89
SCRN1-203ENST00000409570 ZNF697Q5TEC3 545 aa20.6■□□□□ 0.89
SCRN1-203ENST00000409570 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
SCRN1-203ENST00000409570 CABP5Q9NP86 173 aa20.6■□□□□ 0.89
SCRN1-203ENST00000409570 ATP11BQ9Y2G3 1177 aa20.6■□□□□ 0.89
SCRN1-203ENST00000409570 NOP58Q9Y2X3 529 aaKnown RBP20.6■□□□□ 0.89
SCRN1-203ENST00000409570 COL11A1P12107 1806 aaPredicted RBP20.6■□□□□ 0.89
SCRN1-203ENST00000409570 SHHQ15465 462 aa20.59■□□□□ 0.89
SCRN1-203ENST00000409570 OLFML2BQ68BL8 750 aa20.59■□□□□ 0.89
SCRN1-203ENST00000409570 MOV10L1Q9BXT6 1211 aaKnown RBP20.59■□□□□ 0.89
SCRN1-203ENST00000409570 ANTXR1Q9H6X2 564 aa20.59■□□□□ 0.89
SCRN1-203ENST00000409570 ADORA2AP29274 412 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms