RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 CRACR2BQ8N4Y2 399 aaPredicted RBP15.46■□□□□ 0.07
CHRNA1-205ENST00000409542 FRMPD3Q5JV73 1810 aa15.46■□□□□ 0.07
CHRNA1-205ENST00000409542 BAG3O95817 575 aa15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 ZYXQ15942 572 aaKnown RBP15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 SKAP1Q86WV1 359 aa15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 TRMT44Q8IYL2 757 aaKnown RBP15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 ARHGAP45Q92619 1136 aa15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 NOL10Q9BSC4 688 aaKnown RBP15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 PIH1D3Q9NQM4 214 aaKnown RBP15.46■□□□□ 0.06
CHRNA1-205ENST00000409542 MAST2Q6P0Q8 1798 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 GH2P01242 217 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 IGHDP01880 384 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 ZAP70P43403 619 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 ZKSCAN2Q63HK3 967 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L2Q6R6M4 530 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 GUCD1Q96NT3 240 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 APBA2Q99767 749 aa15.45■□□□□ 0.06
CHRNA1-205ENST00000409542 POTEB2H3BUK9 544 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 GNAI2P04899 355 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 RLBP1P12271 317 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 PLCG2P16885 1265 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 MAP2K5Q13163 448 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 TNNI3KQ59H18 835 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 TTC39AQ5SRH9 613 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 CCAR1Q8IX12 1150 aaKnown RBP15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 NPLOC4Q8TAT6 608 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 EDC3Q96F86 508 aaKnown RBP15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 FAM161BQ96MY7 647 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 COL25A1Q9BXS0 654 aaPredicted RBP15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 SENP6Q9GZR1 1112 aaPredicted RBP15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 FPGT-TNNI3KV9GXZ4 949 aa15.44■□□□□ 0.06
CHRNA1-205ENST00000409542 TRIM27P14373 513 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 TRPV1Q8NER1 839 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 DDRGK1Q96HY6 314 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 TRIM34Q9BYJ4 488 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 GINM1Q9NU53 330 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 BTBD7Q9P203 1132 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 RABGAP1Q9Y3P9 1069 aa15.43■□□□□ 0.06
CHRNA1-205ENST00000409542 PTPREP23469 700 aa15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 C8orf34Q49A92 452 aa15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 CATSPERGQ6ZRH7 1159 aa15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 ACER1Q8TDN7 264 aa15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 C12orf42Q96LP6 360 aa15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 TLR7Q9NYK1 1049 aaKnown RBP15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 MYH1P12882 1939 aa15.42■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L15C9J2P7 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L13C9JLJ4 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L11C9JVI0 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L18D6R9N7 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L22D6RA61 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L17D6RBQ6 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L19D6RCP7 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L20D6RJB6 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 CYP7A1P22680 504 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 USP17L24Q0WX57 530 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 POLA2Q14181 598 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 CCDC158Q5M9N0 1113 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 WDR78Q5VTH9 848 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 TATDN1Q6P1N9 297 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 MIGA1Q8NAN2 632 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
CHRNA1-205ENST00000409542 PRUNE2Q8WUY3 3088 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 IGHA2P01877 340 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 HLA-DOAP06340 250 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 CNGA1P29973 690 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 CYP2C19P33261 490 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 GUCY1A2P33402 732 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 CWC22Q9HCG8 908 aaKnown RBP15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 DDX20Q9UHI6 824 aaKnown RBP15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 VCANP13611 3396 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 SLC15A5A6NIM6 579 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 VCAM1P19320 739 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 EVX2Q03828 476 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 RAB3GAP1Q15042 981 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 MFSD14CQ5VZR4 134 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 FAM109BQ6ICB4 259 aaPredicted RBP15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 ATF7IPQ6VMQ6 1270 aa15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 CCDC8Q9H0W5 538 aaPredicted RBP15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 DBNLQ9UJU6 430 aaKnown RBP15.4■□□□□ 0.06
CHRNA1-205ENST00000409542 SPDYE16A6NNV3 312 aaPredicted RBP15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 RTP1P59025 263 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 GRB14Q14449 540 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 GJC2Q5T442 439 aaPredicted RBP15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 ANO1Q5XXA6 986 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 FTSJ3Q8IY81 847 aaKnown RBP15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 TMEM57Q8N5G2 664 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 SSH3Q8TE77 659 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 LPAR1Q92633 364 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 ZNF512BQ96KM6 892 aaPredicted RBP15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 FEZ1Q99689 392 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 KIAA1683Q9H0B3 1180 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 RWDD1Q9H446 243 aaPredicted RBP15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 C1orf115Q9H7X2 142 aa15.39■□□□□ 0.05
CHRNA1-205ENST00000409542 LTBP2Q14767 1821 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 HOXC6P09630 235 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 SHMT1P34896 483 aa15.38■□□□□ 0.05
CHRNA1-205ENST00000409542 USP5P45974 858 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms