RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 CNTNAP5Q8WYK1 1306 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 USP17L3A6NCW0 530 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 USP17L4A6NCW7 530 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 KIF5BP33176 963 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 PLCB2Q00722 1185 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 NR5A1Q13285 461 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 SLC15A2Q16348 729 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 HS1BP3Q53T59 392 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 USP17L1Q7RTZ2 530 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 SRBD1Q8N5C6 995 aaKnown RBP23.87■■□□□ 1.41
USP39-203ENST00000409470 SDF4Q9BRK5 362 aa23.87■■□□□ 1.41
USP39-203ENST00000409470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.86■■□□□ 1.41
USP39-203ENST00000409470 EN1Q05925 392 aaPredicted RBP23.86■■□□□ 1.41
USP39-203ENST00000409470 RILPL1Q5EBL4 403 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 TCP11L1Q9NUJ3 509 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 STK32BQ9NY57 414 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 RGS17Q9UGC6 210 aaPredicted RBP23.86■■□□□ 1.41
USP39-203ENST00000409470 TTF2Q9UNY4 1162 aaKnown RBP23.86■■□□□ 1.41
USP39-203ENST00000409470 RASA1P20936 1047 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 CDK8P49336 464 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 STYK1Q6J9G0 422 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 POTEAQ6S8J7 498 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 CERS5Q8N5B7 392 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 OXER1Q8TDS5 423 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 ANKS1AQ92625 1134 aa23.86■■□□□ 1.41
USP39-203ENST00000409470 ADCY5O95622 1261 aa23.85■■□□□ 1.41
USP39-203ENST00000409470 C16orf86Q6ZW13 317 aa23.85■■□□□ 1.41
USP39-203ENST00000409470 PFKFB1P16118 471 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 KRT2P35908 639 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 PHF20Q9BVI0 1012 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 MXD3Q9BW11 206 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 DNAJC25Q9H1X3 360 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 CBX8Q9HC52 389 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.84■■□□□ 1.41
USP39-203ENST00000409470 CCDC39Q9UFE4 941 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 PTMAP06454 111 aaKnown RBP23.84■■□□□ 1.41
USP39-203ENST00000409470 TOB1P50616 345 aaPredicted RBP23.84■■□□□ 1.41
USP39-203ENST00000409470 LUZP1Q86V48 1076 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 SHISA4Q96DD7 197 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 BRMS1Q9HCU9 246 aa23.84■■□□□ 1.41
USP39-203ENST00000409470 PICALMQ13492 652 aa23.83■■□□□ 1.41
USP39-203ENST00000409470 STX1AQ16623 288 aa23.83■■□□□ 1.41
USP39-203ENST00000409470 CAMKK2Q96RR4 588 aa23.83■■□□□ 1.41
USP39-203ENST00000409470 CABP5Q9NP86 173 aa23.83■■□□□ 1.41
USP39-203ENST00000409470 STX8Q9UNK0 236 aa23.83■■□□□ 1.41
USP39-203ENST00000409470 CUTAO60888 179 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 ZNF202O95125 648 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 CAVIN2O95810 425 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 ZNF165P49910 485 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 ZSCAN30Q86W11 494 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 PIBF1Q8WXW3 757 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 DBNDD1Q9H9R9 158 aa23.83■■□□□ 1.4
USP39-203ENST00000409470 ZNF219Q9P2Y4 722 aaPredicted RBP23.83■■□□□ 1.4
USP39-203ENST00000409470 MYH1P12882 1939 aa23.82■■□□□ 1.4
USP39-203ENST00000409470 DDX60LQ5H9U9 1706 aaKnown RBP23.82■■□□□ 1.4
USP39-203ENST00000409470 SCG2P13521 617 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 ATP2B1P20020 1258 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 CHRNA5P30532 468 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 SCNN1DP51172 638 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 SHC4Q6S5L8 630 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 KRI1Q8N9T8 703 aaKnown RBP23.81■■□□□ 1.4
USP39-203ENST00000409470 CLIC6Q96NY7 704 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 SYKP43405 635 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 GRM4Q14833 912 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 PODNQ7Z5L7 613 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 CEP131Q9UPN4 1083 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 MTMR7Q9Y216 660 aa23.81■■□□□ 1.4
USP39-203ENST00000409470 GNAQP50148 359 aa23.8■■□□□ 1.4
USP39-203ENST00000409470 PFKFB3Q16875 520 aaPredicted RBP23.8■■□□□ 1.4
USP39-203ENST00000409470 ERCC4Q92889 916 aaPredicted RBP23.8■■□□□ 1.4
USP39-203ENST00000409470 CNKSR1Q969H4 720 aa23.8■■□□□ 1.4
USP39-203ENST00000409470 TMEM47Q9BQJ4 181 aa23.8■■□□□ 1.4
USP39-203ENST00000409470 USP40Q9NVE5 1235 aa23.8■■□□□ 1.4
USP39-203ENST00000409470 PCDHB6Q9Y5E3 794 aa23.8■■□□□ 1.4
USP39-203ENST00000409470 SNED1Q8TER0 1413 aa23.8■■□□□ 1.4
USP39-203ENST00000409470 MSNP26038 577 aaKnown RBP23.79■■□□□ 1.4
USP39-203ENST00000409470 RESP18Q5W5W9 173 aa23.79■■□□□ 1.4
USP39-203ENST00000409470 NEDD1Q8NHV4 660 aa23.79■■□□□ 1.4
USP39-203ENST00000409470 ANO10Q9NW15 660 aa23.79■■□□□ 1.4
USP39-203ENST00000409470 STAG2Q8N3U4 1231 aa23.79■■□□□ 1.4
USP39-203ENST00000409470 TEKT1Q969V4 418 aa23.79■■□□□ 1.4
USP39-203ENST00000409470 QSER1Q2KHR3 1735 aa23.79■■□□□ 1.4
USP39-203ENST00000409470 FOCADQ5VW36 1801 aa23.78■■□□□ 1.4
USP39-203ENST00000409470 NLRP5P59047 1200 aa23.78■■□□□ 1.4
USP39-203ENST00000409470 ZRSR1Q15695 479 aaKnown RBP23.78■■□□□ 1.4
USP39-203ENST00000409470 MAD2L2Q9UI95 211 aa23.78■■□□□ 1.4
USP39-203ENST00000409470 HPSEQ9Y251 543 aa23.78■■□□□ 1.4
USP39-203ENST00000409470 BAZ2BQ9UIF8 2168 aaKnown RBP23.78■■□□□ 1.4
USP39-203ENST00000409470 AP5Z1O43299 807 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 HHIPL2Q6UWX4 724 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 KIAA1468Q9P260 1216 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 CLCN1P35523 988 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 C11orf57Q6ZUT1 292 aaPredicted RBP23.77■■□□□ 1.4
USP39-203ENST00000409470 TIGD1Q96MW7 591 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 KCNQ5Q9NR82 932 aa23.77■■□□□ 1.4
USP39-203ENST00000409470 NOL7Q9UMY1 257 aaKnown RBP23.77■■□□□ 1.4
USP39-203ENST00000409470 FAM237AA0A1B0GTK4 181 aa23.76■■□□□ 1.39
USP39-203ENST00000409470 FAM205CA6NFA0 338 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms