RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SLC45A1Q9Y2W3 748 aa23.61■■□□□ 1.37
PDLIM2-207ENST00000409417 PRDM1O75626 825 aa23.6■■□□□ 1.37
PDLIM2-207ENST00000409417 ZFYVE28Q9HCC9 887 aa23.6■■□□□ 1.37
PDLIM2-207ENST00000409417 AGTPBP1Q9UPW5 1226 aa23.6■■□□□ 1.37
PDLIM2-207ENST00000409417 SGSM2O43147 1006 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 CTDSPL2Q05D32 466 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 ZNF444Q8N0Y2 327 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 ACER1Q8TDN7 264 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 FEZ1Q99689 392 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 KIAA1683Q9H0B3 1180 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 KANSL2Q9H9L4 492 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 TMOD4Q9NZQ9 345 aa23.59■■□□□ 1.37
PDLIM2-207ENST00000409417 PTPRFP10586 1907 aa23.58■■□□□ 1.37
PDLIM2-207ENST00000409417 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.58■■□□□ 1.37
PDLIM2-207ENST00000409417 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.58■■□□□ 1.37
PDLIM2-207ENST00000409417 GPR25O00155 361 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 FGRP09769 529 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 USP14P54578 494 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 ICA1Q05084 483 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 TREML2Q5T2D2 321 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 USP17L2Q6R6M4 530 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 EMILIN3Q9NT22 766 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 CTNNA3Q9UI47 895 aa23.57■■□□□ 1.36
PDLIM2-207ENST00000409417 DGKZQ13574 1117 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 SIAH1Q8IUQ4 282 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 PARK7Q99497 189 aaKnown RBP23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 MYH8P13535 1937 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 TLR2O60603 784 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 CLEC10AQ8IUN9 316 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 C12orf42Q96LP6 360 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 ARHGEF10LQ9HCE6 1279 aa23.56■■□□□ 1.36
PDLIM2-207ENST00000409417 A0A1W2PRG0 241 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 ORC4O43929 436 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 HAND2P61296 217 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 PABPC4Q13310 644 aaKnown RBP eCLIP23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 ZNF296Q8WUU4 475 aaPredicted RBP23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 NBPF3Q9H094 633 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 SH2D4AQ9H788 454 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 INCENPQ9NQS7 918 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 TACC3Q9Y6A5 838 aa23.55■■□□□ 1.36
PDLIM2-207ENST00000409417 ZNF213O14771 459 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 TSPY3P0CV98 308 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 TSPY8P0CW00 308 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 CYP2C8P10632 490 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 PCP11498 1178 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 ZYXQ15942 572 aaKnown RBP23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 NEDD1Q8NHV4 660 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 PNMA3Q9UL41 463 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 TMX2Q9Y320 296 aa23.54■■□□□ 1.36
PDLIM2-207ENST00000409417 IGKV6D-41A0A0C4DH26 115 aa23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 FKTNO75072 461 aa23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 EEF2P13639 858 aaKnown RBP23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 HOXA7P31268 230 aaPredicted RBP23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 TFAP4Q01664 338 aa23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 AKNAD1Q5T1N1 836 aa23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 ESYT1Q9BSJ8 1104 aa23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 PLIN4Q96Q06 1357 aa23.53■■□□□ 1.36
PDLIM2-207ENST00000409417 PTH1RQ03431 593 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 IMMTQ16891 758 aaKnown RBP23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 FAM47AQ5JRC9 791 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 COL13A1Q5TAT6 717 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 CASC1Q6TDU7 716 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 MFSD6Q6ZSS7 791 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 TBC1D10CQ8IV04 446 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 STAG1Q8WVM7 1258 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 NYAP2Q9P242 653 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 LOC285556D6RIA3 1793 aa23.52■■□□□ 1.36
PDLIM2-207ENST00000409417 ADGRA2Q96PE1 1338 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 CDC45O75419 566 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 VCAM1P19320 739 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 OSBPP22059 807 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 ATP2B2Q01814 1243 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 C17orf99Q6UX52 265 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 SMCR8Q8TEV9 937 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 ASCC2Q9H1I8 757 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 MTMR4Q9NYA4 1195 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 CASP8AP2Q9UKL3 1982 aa23.51■■□□□ 1.35
PDLIM2-207ENST00000409417 TSPY2A6NKD2 308 aa23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 RANBP6O60518 1105 aaKnown RBP23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 SP3Q02447 781 aa23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 KIAA1211Q6ZU35 1233 aa23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 LPAR1Q92633 364 aa23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 CEP95Q96GE4 821 aa23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 TOMM22Q9NS69 142 aa23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 U3KPZ7 1027 aaPredicted RBP23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 GREB1LQ9C091 1923 aaPredicted RBP23.5■■□□□ 1.35
PDLIM2-207ENST00000409417 IRX3P78415 501 aaPredicted RBP23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 MAP4K1Q92918 833 aa23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 VCPKMTQ9H867 229 aa23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 TTLL1O95922 423 aa23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 RRP12Q5JTH9 1297 aaKnown RBP23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 PPP4R3BQ5MIZ7 849 aa23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 CPA4Q9UI42 421 aa23.49■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L15C9J2P7 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L13C9JLJ4 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L11C9JVI0 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L18D6R9N7 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L22D6RA61 530 aa23.48■■□□□ 1.35
PDLIM2-207ENST00000409417 USP17L17D6RBQ6 530 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms