RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 NEK4P51957 841 aa24.08■■□□□ 1.45
VSX1-203ENST00000409285 SEC23AQ15436 765 aa24.08■■□□□ 1.45
VSX1-203ENST00000409285 CST9Q5W186 159 aa24.08■■□□□ 1.45
VSX1-203ENST00000409285 ENAHQ8N8S7 591 aaPredicted RBP24.08■■□□□ 1.45
VSX1-203ENST00000409285 CEP95Q96GE4 821 aa24.08■■□□□ 1.45
VSX1-203ENST00000409285 MTMR4Q9NYA4 1195 aa24.08■■□□□ 1.45
VSX1-203ENST00000409285 SH2B2O14492 632 aaPredicted RBP24.07■■□□□ 1.44
VSX1-203ENST00000409285 LIFRP42702 1097 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 VGLL4Q14135 290 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 SHROOM1Q2M3G4 852 aaPredicted RBP24.07■■□□□ 1.44
VSX1-203ENST00000409285 RCSD1Q6JBY9 416 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 CHST3Q7LGC8 479 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 C2orf69Q8N8R5 385 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 ZKSCAN4Q969J2 545 aaPredicted RBP24.07■■□□□ 1.44
VSX1-203ENST00000409285 TBC1D2Q9BYX2 928 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 ZNF408Q9H9D4 720 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 SYNPO2Q9UMS6 1093 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 ERICH2A1L162 156 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 NMT2O60551 498 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 PRKG1Q13976 671 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 TTLL12Q14166 644 aaPredicted RBP24.07■■□□□ 1.44
VSX1-203ENST00000409285 SEPT2Q15019 361 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 SGMS1Q86VZ5 419 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 ZKSCAN3Q9BRR0 538 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 PDRG1Q9NUG6 133 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 NYAP2Q9P242 653 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 CSADQ9Y600 493 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 SNCAIPQ9Y6H5 919 aa24.07■■□□□ 1.44
VSX1-203ENST00000409285 IFIT3O14879 490 aaKnown RBP24.06■■□□□ 1.44
VSX1-203ENST00000409285 TTLL1O95922 423 aa24.06■■□□□ 1.44
VSX1-203ENST00000409285 ICA1Q05084 483 aa24.06■■□□□ 1.44
VSX1-203ENST00000409285 TMTC2Q8N394 836 aa24.06■■□□□ 1.44
VSX1-203ENST00000409285 TCEANC2Q96MN5 208 aa24.06■■□□□ 1.44
VSX1-203ENST00000409285 LY9Q9HBG7 655 aa24.06■■□□□ 1.44
VSX1-203ENST00000409285 PICK1Q9NRD5 415 aa24.06■■□□□ 1.44
VSX1-203ENST00000409285 ST18O60284 1047 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 RAB3GAP1Q15042 981 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 ANKRD1Q15327 319 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 TMEM67Q5HYA8 995 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 Q6ZUG5 572 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 MKL1Q969V6 931 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 PARP14Q460N5 1801 aa24.05■■□□□ 1.44
VSX1-203ENST00000409285 PTPRAP18433 802 aa24.04■■□□□ 1.44
VSX1-203ENST00000409285 EVCP57679 992 aa24.04■■□□□ 1.44
VSX1-203ENST00000409285 WTAPQ15007 396 aa24.04■■□□□ 1.44
VSX1-203ENST00000409285 MOB2Q70IA6 237 aa24.04■■□□□ 1.44
VSX1-203ENST00000409285 TSHZ2Q9NRE2 1034 aa24.04■■□□□ 1.44
VSX1-203ENST00000409285 STX8Q9UNK0 236 aa24.04■■□□□ 1.44
VSX1-203ENST00000409285 USP17L5A8MUK1 530 aa24.03■■□□□ 1.44
VSX1-203ENST00000409285 TOB2Q14106 344 aaPredicted RBP24.03■■□□□ 1.44
VSX1-203ENST00000409285 IFIT1BQ5T764 474 aaKnown RBP24.03■■□□□ 1.44
VSX1-203ENST00000409285 SIAH1Q8IUQ4 282 aa24.03■■□□□ 1.44
VSX1-203ENST00000409285 WDR18Q9BV38 432 aa24.03■■□□□ 1.44
VSX1-203ENST00000409285 LRRC2Q9BYS8 371 aa24.03■■□□□ 1.44
VSX1-203ENST00000409285 TOP1P11387 765 aaKnown RBP24.02■■□□□ 1.44
VSX1-203ENST00000409285 EEF2P13639 858 aaKnown RBP24.02■■□□□ 1.44
VSX1-203ENST00000409285 AK2P54819 239 aa24.02■■□□□ 1.44
VSX1-203ENST00000409285 FGD1P98174 961 aa24.02■■□□□ 1.44
VSX1-203ENST00000409285 CLEC10AQ8IUN9 316 aa24.02■■□□□ 1.44
VSX1-203ENST00000409285 SPDYE5A6NIY4 337 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 TMEM88BA6NKF7 163 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 UBE2Q2LH0YL09 131 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 ERO1BQ86YB8 467 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 SH2D4AQ9H788 454 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 AS3MTQ9HBK9 375 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 ARHGEF10LQ9HCE6 1279 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 MYH6P13533 1939 aa24.01■■□□□ 1.43
VSX1-203ENST00000409285 MCM2P49736 904 aa24■■□□□ 1.43
VSX1-203ENST00000409285 RCAN1P53805 252 aa24■■□□□ 1.43
VSX1-203ENST00000409285 PPATQ06203 517 aa24■■□□□ 1.43
VSX1-203ENST00000409285 BRF1Q92994 677 aa24■■□□□ 1.43
VSX1-203ENST00000409285 CLMNQ96JQ2 1002 aa24■■□□□ 1.43
VSX1-203ENST00000409285 TMEM47Q9BQJ4 181 aa24■■□□□ 1.43
VSX1-203ENST00000409285 GPHNQ9NQX3 736 aaPredicted RBP24■■□□□ 1.43
VSX1-203ENST00000409285 CREBZFQ9NS37 354 aa24■■□□□ 1.43
VSX1-203ENST00000409285 FRMD4AQ9P2Q2 1039 aaPredicted RBP24■■□□□ 1.43
VSX1-203ENST00000409285 TMX2Q9Y320 296 aa24■■□□□ 1.43
VSX1-203ENST00000409285 CEP350Q5VT06 3117 aa24■■□□□ 1.43
VSX1-203ENST00000409285 NID2Q14112 1375 aa24■■□□□ 1.43
VSX1-203ENST00000409285 SAPCD2Q86UD0 394 aa24■■□□□ 1.43
VSX1-203ENST00000409285 SENP2Q9HC62 589 aa24■■□□□ 1.43
VSX1-203ENST00000409285 ZNF280CQ8ND82 737 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 SNX21Q969T3 373 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 HHIPL1Q96JK4 782 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 KIAA1683Q9H0B3 1180 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 KAT14Q9H8E8 782 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 CLIP2Q9UDT6 1046 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 AFG3L2Q9Y4W6 797 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 TLL2Q9Y6L7 1015 aa23.99■■□□□ 1.43
VSX1-203ENST00000409285 A0A1W2PRG0 241 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 PPIL2Q13356 520 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 APOA5Q6Q788 366 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 PNMA1Q8ND90 353 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 GMCL1P1Q8NEA9 526 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 ELP3Q9H9T3 547 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 ZHX2Q9Y6X8 837 aa23.98■■□□□ 1.43
VSX1-203ENST00000409285 CCDC69A6NI79 296 aa23.97■■□□□ 1.43
VSX1-203ENST00000409285 DDAH1O94760 285 aa23.97■■□□□ 1.43
VSX1-203ENST00000409285 HUNKP57058 714 aa23.97■■□□□ 1.43
VSX1-203ENST00000409285 HTRA3P83110 453 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms