RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 UBA5Q9GZZ9 404 aa9.65□□□□□ -0.86
SH3D19-202ENST00000409252 HERC5Q9UII4 1024 aaKnown RBP9.65□□□□□ -0.86
SH3D19-202ENST00000409252 DLG5Q8TDM6 1919 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 ENTPD3O75355 529 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 LETM2Q2VYF4 491 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 PRAMEF18Q5VWM3 479 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 LRP10Q7Z4F1 713 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 FBXO11Q86XK2 927 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.87
SH3D19-202ENST00000409252 MAGEC2Q9UBF1 373 aaPredicted RBP9.65□□□□□ -0.87
SH3D19-202ENST00000409252 PNMA2Q9UL42 364 aa9.65□□□□□ -0.87
SH3D19-202ENST00000409252 LETM1O95202 739 aaPredicted RBP9.64□□□□□ -0.87
SH3D19-202ENST00000409252 VEGFAP15692 232 aaPredicted RBP9.64□□□□□ -0.87
SH3D19-202ENST00000409252 MCM7P33993 719 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 ARHGEF6Q15052 776 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 NFKBIBQ15653 356 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 CRY2Q49AN0 593 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 ANKRD35Q8N283 1001 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 LLPHQ9BRT6 129 aaKnown RBP9.64□□□□□ -0.87
SH3D19-202ENST00000409252 PNMA3Q9UL41 463 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 GLI3P10071 1580 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 SMC2O95347 1197 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 IL1R1P14778 569 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 CTR9Q6PD62 1173 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 RASEFQ8IZ41 740 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 RRAGCQ9HB90 399 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 DACH1Q9UI36 760 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 MRPL11Q9Y3B7 192 aaKnown RBP9.64□□□□□ -0.87
SH3D19-202ENST00000409252 LIG1P18858 919 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 HDLBPQ00341 1268 aaKnown RBP9.64□□□□□ -0.87
SH3D19-202ENST00000409252 SEPT2Q15019 361 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 CDC37L1Q7L3B6 337 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 GPC2Q8N158 579 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 ZSWIM6Q9HCJ5 1215 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 ZMYM6O95789 1325 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 GSG1L2A8MUP6 293 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 CELF2O95319 508 aaKnown RBP9.64□□□□□ -0.87
SH3D19-202ENST00000409252 STAT2P52630 851 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 PIK3AP1Q6ZUJ8 805 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 FAM151AQ8WW52 585 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 NUP62CLQ9H1M0 184 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 DEFB129Q9H1M3 183 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 ELP3Q9H9T3 547 aa9.64□□□□□ -0.87
SH3D19-202ENST00000409252 BACH1O14867 736 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 KCTD2Q14681 263 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 BRDTQ58F21 947 aaPredicted RBP9.63□□□□□ -0.87
SH3D19-202ENST00000409252 TBC1D10CQ8IV04 446 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 FSIP1Q8NA03 581 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 STAG1Q8WVM7 1258 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 ZBTB21Q9ULJ3 1066 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 SLC16A2P36021 539 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 AMIGO3Q86WK7 504 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 ZNF274Q96GC6 653 aaPredicted RBP9.63□□□□□ -0.87
SH3D19-202ENST00000409252 TMEM39BQ9GZU3 492 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 VPS54Q9P1Q0 977 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 XIRP1Q702N8 1843 aaKnown RBP9.63□□□□□ -0.87
SH3D19-202ENST00000409252 TRAK2O60296 914 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 PDILTQ8N807 584 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 PANK2Q9BZ23 570 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 ZSWIM5Q9P217 1185 aa9.63□□□□□ -0.87
SH3D19-202ENST00000409252 SPP2Q13103 211 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 INTS4Q96HW7 963 aaKnown RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 NEDD4P46934 1319 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 NT5C2P49902 561 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 KRT25Q7Z3Z0 450 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 DIS3L2Q8IYB7 885 aaKnown RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 REXO1Q8N1G1 1221 aaKnown RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 RGPD1P0DJD0 1748 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 SMCO2A6NFE2 343 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 USP17L10C9JJH3 530 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 F13A1P00488 732 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 NONOQ15233 471 aaKnown RBP eCLIP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 GTF3C6Q969F1 213 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 PRMT6Q96LA8 375 aaPredicted RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 GCOM1H8Y6P7 765 aaPredicted RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 POLR2MP0CAP2 368 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 IDEP14735 1019 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 ADD1P35611 737 aaKnown RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 ZNF157P51786 506 aaPredicted RBP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 HUNKP57058 714 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 SYDE2Q5VT97 1194 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 ARHGEF16Q5VV41 709 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 CNNM3Q8NE01 707 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 GPKOWQ92917 476 aaPredicted RBP eCLIP9.62□□□□□ -0.87
SH3D19-202ENST00000409252 KCNJ14Q9UNX9 436 aa9.62□□□□□ -0.87
SH3D19-202ENST00000409252 NOP56O00567 594 aaKnown RBP9.61□□□□□ -0.87
SH3D19-202ENST00000409252 SH2B2O14492 632 aaPredicted RBP9.61□□□□□ -0.87
SH3D19-202ENST00000409252 JAK2O60674 1132 aa9.61□□□□□ -0.87
SH3D19-202ENST00000409252 ME3Q16798 604 aa9.61□□□□□ -0.87
SH3D19-202ENST00000409252 APOA5Q6Q788 366 aa9.61□□□□□ -0.87
SH3D19-202ENST00000409252 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
SH3D19-202ENST00000409252 DPP9Q86TI2 863 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms