RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 A0A0D9SFI3 127 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 OSBPP22059 807 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 ZYXQ15942 572 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 OTOP1Q7RTM1 612 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 ACER1Q8TDN7 264 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 EFCC1Q9HA90 598 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 MKNK2Q9HBH9 465 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 EMILIN3Q9NT22 766 aa21.42■■□□□ 1.02
PDLIM2-206ENST00000409141 USP14P54578 494 aa21.41■■□□□ 1.02
PDLIM2-206ENST00000409141 LACTBP83111 547 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-206ENST00000409141 KIAA1683Q9H0B3 1180 aa21.41■■□□□ 1.02
PDLIM2-206ENST00000409141 ASCC2Q9H1I8 757 aaPredicted RBP21.4■■□□□ 1.02
PDLIM2-206ENST00000409141 ECM2O94769 699 aaPredicted RBP21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 BCRP11274 1271 aa21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 HOXA7P31268 230 aaPredicted RBP21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 IRX3P78415 501 aaPredicted RBP21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 CAP1Q01518 475 aa21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 TTC22Q5TAA0 569 aa21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 VPS53Q5VIR6 699 aa21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 FBXO46Q6PJ61 603 aaPredicted RBP21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 ZNF287Q9HBT7 754 aa21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 DIAPH3Q9NSV4 1193 aa21.39■■□□□ 1.02
PDLIM2-206ENST00000409141 HIP1O00291 1037 aa21.39■■□□□ 1.01
PDLIM2-206ENST00000409141 FOXP2O15409 715 aa21.39■■□□□ 1.01
PDLIM2-206ENST00000409141 SLC3A2P08195 630 aaKnown RBP21.39■■□□□ 1.01
PDLIM2-206ENST00000409141 ARHGAP39Q9C0H5 1083 aa21.39■■□□□ 1.01
PDLIM2-206ENST00000409141 ROBO3Q96MS0 1386 aa21.39■■□□□ 1.01
PDLIM2-206ENST00000409141 LOC285556D6RIA3 1793 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 CCDC85CA6NKD9 419 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 RASA1P20936 1047 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 MFAP1P55081 439 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 ICA1Q05084 483 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 PPARAQ07869 468 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 CWC27Q6UX04 472 aaKnown RBP21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 ZNF589Q86UQ0 364 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 ZNF444Q8N0Y2 327 aaPredicted RBP21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 C12orf42Q96LP6 360 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 ARHGEF10LQ9HCE6 1279 aa21.38■■□□□ 1.01
PDLIM2-206ENST00000409141 CCDC171Q6TFL3 1326 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 A0A1W2PRG0 241 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 PRDM1O75626 825 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 PSMC4P43686 418 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 PDE4BQ07343 736 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 CENPQQ7L2Z9 268 aaPredicted RBP21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 CLEC10AQ8IUN9 316 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 ANKRD13CQ8N6S4 541 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 P2RX7Q99572 595 aaKnown RBP21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 KANSL2Q9H9L4 492 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 HPS5Q9UPZ3 1129 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 PTPN22Q9Y2R2 807 aa21.37■■□□□ 1.01
PDLIM2-206ENST00000409141 FMNL1O95466 1100 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 NEFLP07196 543 aa21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 HSPD1P10809 573 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 GSPT1P15170 499 aaKnown RBP21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 GCLCP48506 637 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 ATP2B2Q01814 1243 aa21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 ALX1Q15699 326 aa21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 SIAH1Q8IUQ4 282 aa21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 MYH8P13535 1937 aa21.36■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L15C9J2P7 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L13C9JLJ4 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L11C9JVI0 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L18D6R9N7 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L22D6RA61 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L17D6RBQ6 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L19D6RCP7 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L20D6RJB6 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 GNRH1P01148 92 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 USP17L24Q0WX57 530 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 SH2D4AQ9H788 454 aa21.35■■□□□ 1.01
PDLIM2-206ENST00000409141 FGAP02671 866 aa21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 EEF2P13639 858 aaKnown RBP21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 VCAM1P19320 739 aa21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 CTGFP29279 349 aa21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 CTDSPL2Q05D32 466 aa21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 TRIM47Q96LD4 638 aa21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 TMX2Q9Y320 296 aa21.34■■□□□ 1.01
PDLIM2-206ENST00000409141 FCGRTP55899 365 aa21.33■■□□□ 1.01
PDLIM2-206ENST00000409141 HERVK_113P62684 666 aa21.33■■□□□ 1.01
PDLIM2-206ENST00000409141 FAM110CQ1W6H9 321 aa21.33■■□□□ 1.01
PDLIM2-206ENST00000409141 CATSPERGQ6ZRH7 1159 aa21.33■■□□□ 1.01
PDLIM2-206ENST00000409141 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.33■■□□□ 1.01
PDLIM2-206ENST00000409141 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
PDLIM2-206ENST00000409141 HOXD10P28358 340 aa21.32■■□□□ 1
PDLIM2-206ENST00000409141 CCDC136Q96JN2 1154 aa21.32■■□□□ 1
PDLIM2-206ENST00000409141 RPAP3Q9H6T3 665 aaPredicted RBP21.32■■□□□ 1
PDLIM2-206ENST00000409141 ANAPC4Q9UJX5 808 aa21.32■■□□□ 1
PDLIM2-206ENST00000409141 TSPY3P0CV98 308 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 TSPY8P0CW00 308 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 FAM47AQ5JRC9 791 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 KIAA1755Q5JYT7 1200 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 SPICE1Q8N0Z3 855 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 GTF3C2Q8WUA4 911 aaPredicted RBP21.31■■□□□ 1
PDLIM2-206ENST00000409141 LPAR1Q92633 364 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 VCPKMTQ9H867 229 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 INCENPQ9NQS7 918 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 SRRDQ9UH36 339 aa21.31■■□□□ 1
PDLIM2-206ENST00000409141 PRMT2P55345 433 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 TFAP4Q01664 338 aa21.3■■□□□ 1
PDLIM2-206ENST00000409141 GPRC5AQ8NFJ5 357 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms