RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 PARP3Q9Y6F1 533 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 MAGEB6P1A0A0J9YX57 407 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 A0A1W2PQ27 194 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 A0A1W2PQ64 194 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 A0A1W2PQD8 194 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 CTSWP56202 376 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 REXO1L1PQ8IX06 675 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 FANCBQ8NB91 859 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 NELFBQ8WX92 580 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 IFT81Q8WYA0 676 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNX13-201ENST00000409076 TEX13AQ9BXU3 409 aaPredicted RBP9.42□□□□□ -0.9
SNX13-201ENST00000409076 DACH1Q9UI36 760 aa9.42□□□□□ -0.9
SNX13-201ENST00000409076 DIP2BQ9P265 1576 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 H3BQF6 201 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 HGSO14964 777 aaPredicted RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 FOXP2O15409 715 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 UBA7P41226 1012 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 ATP1A2P50993 1020 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 CC2D1AQ6P1N0 951 aaPredicted RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 RBM43Q6ZSC3 357 aaKnown RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 IQCA1Q86XH1 822 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 NOA1Q8NC60 698 aaKnown RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 SLC44A5Q8NCS7 719 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 NBPF3Q9H094 633 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 IMPACTQ9P2X3 320 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 A0A087X0B3 334 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 BUB1O43683 1085 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 TADA3O75528 432 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 KRT2P35908 639 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 ASIC1P78348 528 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 C2orf54Q08AI8 447 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 INF2Q27J81 1249 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 TTC38Q5R3I4 469 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 CCDC181Q5TID7 509 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 CTR9Q6PD62 1173 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 RUFY1Q96T51 708 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 PNKPQ96T60 521 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 C19orf44Q9H6X5 657 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 NLRC4Q9NPP4 1024 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 PDE8BO95263 885 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 TOB1P50616 345 aaPredicted RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 KRT26Q7Z3Y9 468 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 TC2NQ8N9U0 490 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 STRBPQ96SI9 672 aaKnown RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 TSPYL1Q9H0U9 437 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 OSBPL5Q9H0X9 879 aaPredicted RBP9.41□□□□□ -0.9
SNX13-201ENST00000409076 TMEM51Q9NW97 253 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 SAMM50Q9Y512 469 aa9.41□□□□□ -0.9
SNX13-201ENST00000409076 REREQ9P2R6 1566 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 B4DLN1 442 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 VSNL1P62760 191 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 PICALMQ13492 652 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 LRRC41Q15345 812 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 RABL6Q3YEC7 729 aaPredicted RBP9.4□□□□□ -0.9
SNX13-201ENST00000409076 TMC4Q7Z404 712 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 SMARCC1Q92922 1105 aaPredicted RBP9.4□□□□□ -0.9
SNX13-201ENST00000409076 KDM6AO15550 1401 aaPredicted RBP9.4□□□□□ -0.9
SNX13-201ENST00000409076 MEGF6O75095 1541 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 TXLNAP40222 546 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 DUSP10Q9Y6W6 482 aa9.4□□□□□ -0.9
SNX13-201ENST00000409076 H0YHG0 523 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 ADAMTS3O15072 1205 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 ERLIN1O75477 346 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 MMP1P03956 469 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 PDIA4P13667 645 aaKnown RBP9.4□□□□□ -0.91
SNX13-201ENST00000409076 PIP4K2BP78356 416 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 E2F4Q16254 413 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 NLRP10Q86W26 655 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 MICALL1Q8N3F8 863 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 ESR2Q92731 530 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 ADAM21Q9UKJ8 722 aa9.4□□□□□ -0.91
SNX13-201ENST00000409076 PSDA5PKW4 1024 aaPredicted RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 SMIM23A6NLE4 172 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 BACH1O14867 736 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RESP18Q5W5W9 173 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 TRIM65Q6PJ69 517 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 DZIP1Q86YF9 867 aaKnown RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 WASF1Q92558 559 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 SEPT11Q9NVA2 429 aaKnown RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 TACC3Q9Y6A5 838 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 HEG1Q9ULI3 1381 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 C3P01024 1663 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RNF225M0QZC1 329 aaPredicted RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 KLRK1P26718 216 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 IKQ13123 557 aaPredicted RBP9.39□□□□□ -0.91
SNX13-201ENST00000409076 SUSD4Q5VX71 490 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 ADGRA1Q86SQ6 560 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 CDK5RAP3Q96JB5 506 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 SLC39A2Q9NP94 309 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 RGPD2P0DJD1 1756 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
SNX13-201ENST00000409076 AKR1B10O60218 316 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms