RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 NAV1Q8NEY1 1877 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 MYH1P12882 1939 aa11.65□□□□□ -0.54
NIF3L1-202ENST00000409020 ASNSP08243 561 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 BACE1P56817 501 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 MTFR1Q15390 333 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 SH3D19Q5HYK7 790 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 MYPNQ86TC9 1320 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 PROCA1Q8NCQ7 364 aaPredicted RBP11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 WDR18Q9BV38 432 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 ASCC2Q9H1I8 757 aaPredicted RBP11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 DCP1AQ9NPI6 582 aaPredicted RBP11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 SERPINB13Q9UIV8 391 aa11.65□□□□□ -0.55
NIF3L1-202ENST00000409020 CYP2D7A0A087X1C5 515 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 ACER1Q8TDN7 264 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 DYNLL2Q96FJ2 89 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 ARID3AQ99856 593 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 PUS7LQ9H0K6 701 aaKnown RBP11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 EHD4Q9H223 541 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
NIF3L1-202ENST00000409020 POLR3DP05423 398 aaPredicted RBP11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 GABPAQ06546 454 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 RAB3GAP1Q15042 981 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 ARHGEF6Q15052 776 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 CERS3Q8IU89 383 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 AS3MTQ9HBK9 375 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
NIF3L1-202ENST00000409020 USP17L10C9JJH3 530 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 FCGRTP55899 365 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 CEP290O15078 2479 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 GNRH1P01148 92 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 ELNP15502 786 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 FLT3LGP49771 235 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 ABCB5Q2M3G0 1257 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 TMED8Q6PL24 325 aaPredicted RBP11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 RAET1EQ8TD07 263 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
NIF3L1-202ENST00000409020 RBBP6Q7Z6E9 1792 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 MGAMO43451 1857 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 A0A1W2PRG0 241 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 TNPO2O14787 897 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 GRK4P32298 578 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 SEPT2Q15019 361 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 UBE3CQ15386 1083 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 NBPF11Q86T75 865 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 SMAP1Q8IYB5 467 aaPredicted RBP11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 TMOD4Q9NZQ9 345 aa11.61□□□□□ -0.55
NIF3L1-202ENST00000409020 MPHOSPH10O00566 681 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 PRMT2P55345 433 aa11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 HERVK_113P62684 666 aa11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 PI4K2BQ8TCG2 481 aa11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 SLC4A4Q9Y6R1 1079 aa11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 BAZ2AQ9UIF9 1905 aaKnown RBP11.6□□□□□ -0.55
NIF3L1-202ENST00000409020 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 USP17L21D6R901 530 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 M0R2C6 588 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 AKR1B1P15121 316 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 VCAM1P19320 739 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 HOXD10P28358 340 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 PABPC4Q13310 644 aaKnown RBP eCLIP11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 Q3C1V9 767 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 KBTBD3Q8NAB2 608 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 GINM1Q9NU53 330 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 MYH7P12883 1935 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 C19orf81C9J6K1 198 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 ADCY3O60266 1144 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 CNMDO75829 334 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 TPM2P07951 284 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 CCL5P13501 91 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 TRIM32Q13049 653 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 C12orf60Q5U649 245 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 CTR9Q6PD62 1173 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 SIAH1Q8IUQ4 282 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
NIF3L1-202ENST00000409020 SEC62Q99442 399 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms