RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 MSCO60682 206 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 FARP2O94887 1054 aaPredicted RBP15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 SLC34A2O95436 690 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 TFRCP02786 760 aaKnown RBP15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 ZKSCAN1P17029 563 aaPredicted RBP15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 ERVK-9P63128 1117 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 ERVK-24P63145 666 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 LBX2Q6XYB7 198 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 DNAJC18Q9H819 358 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 DCP1AQ9NPI6 582 aaPredicted RBP15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 PHIPQ8WWQ0 1821 aa15.43■□□□□ 0.06
SNORD88B-201ENST00000408454 STRNO43815 780 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 MBD4O95243 580 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 MYCP01106 439 aaPredicted RBP15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 PLEKHH3Q7Z736 793 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 DPF3Q92784 378 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 DCTPP1Q9H773 170 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 KANSL2Q9H9L4 492 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 GOPCQ9HD26 462 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 MYH1P12882 1939 aa15.42■□□□□ 0.06
SNORD88B-201ENST00000408454 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 GABPAQ06546 454 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 COG2Q14746 738 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 MFSD14CQ5VZR4 134 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 NECAB2Q7Z6G3 386 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 SIRT2Q8IXJ6 389 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 KBTBD3Q8NAB2 608 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 P2RX7Q99572 595 aaKnown RBP15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 APBA2Q99767 749 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 PAGR1Q9BTK6 254 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 SLC4A4Q9Y6R1 1079 aa15.41■□□□□ 0.06
SNORD88B-201ENST00000408454 MGAMO43451 1857 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 NAV1Q8NEY1 1877 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 VCAM1P19320 739 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 SHMT1P34896 483 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 ICA1Q05084 483 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 CATSPERGQ6ZRH7 1159 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 LCORLQ8N3X6 602 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 APPBP2Q92624 585 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 TANGO6Q9C0B7 1094 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.4■□□□□ 0.064e-45■■■■□ 21.6
SNORD88B-201ENST00000408454 MKNK2Q9HBH9 465 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 PAK6Q9NQU5 681 aaPredicted RBP15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 EMILIN3Q9NT22 766 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 GABRQQ9UN88 632 aa15.4■□□□□ 0.06
SNORD88B-201ENST00000408454 SLC15A5A6NIM6 579 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 ELNP15502 786 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 CTGFP29279 349 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 PLCD1P51178 756 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 MTFR1Q15390 333 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 ZYXQ15942 572 aaKnown RBP15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 WDR78Q5VTH9 848 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 SHCBP1Q8NEM2 672 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 SDR42E1Q8WUS8 393 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 DEFB118Q96PH6 123 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 MROH8Q9H579 483 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 ARMT1Q9H993 441 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 SYNPO2Q9UMS6 1093 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 NDUFB9Q9Y6M9 179 aa15.39■□□□□ 0.05
SNORD88B-201ENST00000408454 CDK5RAP2Q96SN8 1893 aa15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 SLC25A27O95847 323 aa15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 C12orf60Q5U649 245 aa15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 GPR142Q7Z601 462 aa15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 NBPF3Q9H094 633 aa15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 UNC93B1Q9H1C4 597 aa15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 RPAP3Q9H6T3 665 aaPredicted RBP15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 CTDP1Q9Y5B0 961 aaPredicted RBP15.38■□□□□ 0.05
SNORD88B-201ENST00000408454 A0A1W2PPC1 479 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 RNF113AO15541 343 aaKnown RBP15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 EVI5O60447 810 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 TDO2P48775 406 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 CAP1Q01518 475 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 PDE4BQ07343 736 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 MAP2K5Q13163 448 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 SEPT2Q15019 361 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 C16orf86Q6ZW13 317 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 EDC3Q96F86 508 aaKnown RBP15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 RBPJLQ9UBG7 517 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 TMX2Q9Y320 296 aa15.37■□□□□ 0.05
SNORD88B-201ENST00000408454 SIPA1L1O43166 1804 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 USP17L12C9JPN9 530 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 USP17L21D6R901 530 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 APPP05067 770 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 SLURP2P0DP57 97 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 CYP2B6P20813 491 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 ATP2B2Q01814 1243 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 DPP9Q86TI2 863 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 ZNF444Q8N0Y2 327 aaPredicted RBP15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 ABRAQ8N0Z2 381 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 VCPKMTQ9H867 229 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 GJD2Q9UKL4 321 aa15.36■□□□□ 0.05
SNORD88B-201ENST00000408454 KIAA0100Q14667 2235 aaKnown RBP15.35■□□□□ 0.05
SNORD88B-201ENST00000408454 FLOT1O75955 427 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms