RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 GCC1Q96CN9 775 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 EDC3Q96F86 508 aaKnown RBP10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 ZNF287Q9HBT7 754 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 ARHGEF10LQ9HCE6 1279 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 SLC4A4Q9Y6R1 1079 aa10.91□□□□□ -0.66
SNORD88A-201ENST00000408314 ECM2O94769 699 aaPredicted RBP10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 GJB1P08034 283 aa10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 CTGFP29279 349 aa10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 PLCD1P51178 756 aa10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 TRMT44Q8IYL2 757 aaKnown RBP10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 APPBP2Q92624 585 aa10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 LPAR1Q92633 364 aa10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
SNORD88A-201ENST00000408314 MYH8P13535 1937 aa10.9□□□□□ -0.67
SNORD88A-201ENST00000408314 RNF113AO15541 343 aaKnown RBP10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 HMGCRP04035 888 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 EN2P19622 333 aaPredicted RBP10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 MX1P20591 662 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 JAG1P78504 1218 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 ZYXQ15942 572 aaKnown RBP10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 C12orf60Q5U649 245 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 P2RX7Q99572 595 aaKnown RBP10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 NACAP1Q9BZK3 213 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 RNF208Q9H0X6 261 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
SNORD88A-201ENST00000408314 MYCP01106 439 aaPredicted RBP10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 INHAP05111 366 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 CCL5P13501 91 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 VCAM1P19320 739 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 GJA8P48165 433 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 ERVK-24P63145 666 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 ICA1Q05084 483 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 HDAC1Q13547 482 aaPredicted RBP10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 SEPT2Q15019 361 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 LBX2Q6XYB7 198 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 C16orf86Q6ZW13 317 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 TICAM2Q86XR7 235 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 NUDT12Q9BQG2 462 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 PAGR1Q9BTK6 254 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 FSD1Q9BTV5 496 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 HTATIP2Q9BUP3 242 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 GABRQQ9UN88 632 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 PCDHB15Q9Y5E8 787 aa10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 TNRC18O15417 2968 aaPredicted RBP10.88□□□□□ -0.67
SNORD88A-201ENST00000408314 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 USP17L21D6R901 530 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 PRKAB2O43741 272 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 XRCC5P13010 732 aaKnown RBP10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 RGS2P41220 211 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 TDO2P48775 406 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 SBK1Q52WX2 424 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 CATSPERGQ6ZRH7 1159 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 MB21D1Q8N884 522 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 PUS7LQ9H0K6 701 aaKnown RBP10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 RPAP3Q9H6T3 665 aaPredicted RBP10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 KANSL2Q9H9L4 492 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 GOPCQ9HD26 462 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 HOXC10Q9NYD6 342 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 IVNS1ABPQ9Y6Y0 642 aa10.87□□□□□ -0.67
SNORD88A-201ENST00000408314 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 GPAA1O43292 621 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 APPP05067 770 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 CYP2D6P10635 497 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 ELNP15502 786 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 ZKSCAN1P17029 563 aaPredicted RBP10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 CDK8P49336 464 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 MTFR1Q15390 333 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 SHROOM1Q2M3G4 852 aaPredicted RBP10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 CTR9Q6PD62 1173 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 PLEKHH3Q7Z736 793 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 ACER1Q8TDN7 264 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 APBA2Q99767 749 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 RWDD1Q9H446 243 aaPredicted RBP10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 MKNK2Q9HBH9 465 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 RBPJLQ9UBG7 517 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 ROBO3Q96MS0 1386 aa10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 BAZ2AQ9UIF9 1905 aaKnown RBP10.86□□□□□ -0.67
SNORD88A-201ENST00000408314 AKR1B1P15121 316 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 GUCY1A2P33402 732 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 COG2Q14746 738 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 ANKRD45Q5TZF3 282 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 TSHZ3Q63HK5 1081 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 SLC44A5Q8NCS7 719 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 PI4K2BQ8TCG2 481 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 U2AF1L4Q8WU68 220 aaKnown RBP10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 EVI5LQ96CN4 794 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 DYNLL2Q96FJ2 89 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 VCPKMTQ9H867 229 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 HMX1Q9NP08 348 aaPredicted RBP10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 TMX2Q9Y320 296 aa10.85□□□□□ -0.67
SNORD88A-201ENST00000408314 RPTORQ8N122 1335 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms