RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 ZNF18P17022 549 aa18.94■□□□□ 0.62
COL23A1-202ENST00000407622 CASP1P29466 404 aa18.94■□□□□ 0.62
COL23A1-202ENST00000407622 ZNF579Q8NAF0 562 aaKnown RBP18.94■□□□□ 0.62
COL23A1-202ENST00000407622 V9GY48 417 aaPredicted RBP18.94■□□□□ 0.62
COL23A1-202ENST00000407622 NRDCO43847 1150 aa18.94■□□□□ 0.62
COL23A1-202ENST00000407622 CCDC93Q567U6 631 aa18.94■□□□□ 0.62
COL23A1-202ENST00000407622 FBXO38Q6PIJ6 1188 aa18.94■□□□□ 0.62
COL23A1-202ENST00000407622 CELF1Q92879 486 aaKnown RBP18.94■□□□□ 0.62
COL23A1-202ENST00000407622 FAM84BQ96KN1 310 aaPredicted RBP18.94■□□□□ 0.62
COL23A1-202ENST00000407622 PHF20Q9BVI0 1012 aa18.94■□□□□ 0.62
COL23A1-202ENST00000407622 SAMSN1Q9NSI8 373 aaKnown RBP18.94■□□□□ 0.62
COL23A1-202ENST00000407622 MYH13Q9UKX3 1938 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 SCN7AQ01118 1682 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 NMT2O60551 498 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 IFIT1BQ5T764 474 aaKnown RBP18.93■□□□□ 0.62
COL23A1-202ENST00000407622 TRIM65Q6PJ69 517 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 BICDL1Q6ZP65 573 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 HOMER1Q86YM7 354 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 REXO1L1PQ8IX06 675 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 DHX58Q96C10 678 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 HOOK1Q9UJC3 728 aaKnown RBP18.93■□□□□ 0.62
COL23A1-202ENST00000407622 MINPP1Q9UNW1 487 aa18.93■□□□□ 0.62
COL23A1-202ENST00000407622 TBX2Q13207 712 aaPredicted RBP18.92■□□□□ 0.62
COL23A1-202ENST00000407622 CTR9Q6PD62 1173 aa18.92■□□□□ 0.62
COL23A1-202ENST00000407622 FEZ1Q99689 392 aa18.92■□□□□ 0.62
COL23A1-202ENST00000407622 AKAP17AQ02040 695 aaKnown RBP18.92■□□□□ 0.62
COL23A1-202ENST00000407622 TROAPQ12815 778 aa18.92■□□□□ 0.62
COL23A1-202ENST00000407622 UBE4AQ14139 1066 aa18.92■□□□□ 0.62
COL23A1-202ENST00000407622 DHX8Q14562 1220 aaKnown RBP18.92■□□□□ 0.62
COL23A1-202ENST00000407622 LINC00116Q8NCU8 138 aa18.92■□□□□ 0.62
COL23A1-202ENST00000407622 GNL3LQ9NVN8 582 aaKnown RBP18.92■□□□□ 0.62
COL23A1-202ENST00000407622 DNAI1Q9UI46 699 aa18.92■□□□□ 0.62
COL23A1-202ENST00000407622 DDX41Q9UJV9 622 aaKnown RBP18.92■□□□□ 0.62
COL23A1-202ENST00000407622 TRIM75PA6NK02 468 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 AFMP43652 599 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ETF1P62495 437 aaKnown RBP18.91■□□□□ 0.62
COL23A1-202ENST00000407622 NPY5RQ15761 445 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ERCC6LQ2NKX8 1250 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 MLKLQ8NB16 471 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ZNF397Q8NF99 534 aaPredicted RBP18.91■□□□□ 0.62
COL23A1-202ENST00000407622 SPATA20Q8TB22 786 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
COL23A1-202ENST00000407622 BSDC1Q9NW68 430 aaPredicted RBP18.91■□□□□ 0.62
COL23A1-202ENST00000407622 CEP131Q9UPN4 1083 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 NHSQ6T4R5 1651 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 USP17L12C9JPN9 530 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 USP17L21D6R901 530 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 MYO1BO43795 1136 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 KRT2P35908 639 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ADKP55263 362 aaKnown RBP18.91■□□□□ 0.62
COL23A1-202ENST00000407622 BRIP1Q9BX63 1249 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 OGFRQ9NZT2 677 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ZNF831Q5JPB2 1677 aa18.91■□□□□ 0.62
COL23A1-202ENST00000407622 ADAMTS3O15072 1205 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 PRPF3O43395 683 aaKnown RBP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 CDK11BP21127 795 aaKnown RBP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 DMTNQ08495 405 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 SF3B3Q15393 1217 aaKnown RBP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 CATIPQ7Z7H3 387 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 AATFQ9NY61 560 aaKnown RBP eCLIP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 TC2NQ8N9U0 490 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 SYMPKQ92797 1274 aaKnown RBP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 ZNF652Q9Y2D9 606 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
COL23A1-202ENST00000407622 DLEC1Q9Y238 1755 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 BTAF1O14981 1849 aa18.9■□□□□ 0.62
COL23A1-202ENST00000407622 VWA3AA6NCI4 1184 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 VEGFAP15692 232 aaPredicted RBP18.89■□□□□ 0.61
COL23A1-202ENST00000407622 ZNF174Q15697 407 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 FAM47AQ5JRC9 791 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 TNFRSF25Q93038 417 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 FGRP09769 529 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 CYP2D6P10635 497 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 PLCD1P51178 756 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 TMTC3Q6ZXV5 915 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 SMYD4Q8IYR2 804 aaPredicted RBP18.89■□□□□ 0.61
COL23A1-202ENST00000407622 SRBD1Q8N5C6 995 aaKnown RBP18.89■□□□□ 0.61
COL23A1-202ENST00000407622 NSUN4Q96CB9 384 aaKnown RBP18.89■□□□□ 0.61
COL23A1-202ENST00000407622 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
COL23A1-202ENST00000407622 IGSF3O75054 1194 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 STX17P56962 302 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 MECOMQ03112 1051 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 PPP2R5BQ15173 497 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 SPECC1LQ69YQ0 1117 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 KLHL10Q6JEL2 608 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 TOGARAM2Q6ZUX3 1019 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 IQCA1Q86XH1 822 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 FAM177A1Q8N128 213 aaPredicted RBP18.88■□□□□ 0.61
COL23A1-202ENST00000407622 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 TRIML1Q8N9V2 468 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 PAGE5Q96GU1 130 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 TFCP2L1Q9NZI6 479 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 JAG2Q9Y219 1238 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 PPP2R2CQ9Y2T4 447 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 PHLPP2Q6ZVD8 1323 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 XBP1P17861 261 aa18.88■□□□□ 0.61
COL23A1-202ENST00000407622 SLC4A8Q2Y0W8 1093 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms