RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 SOGA3Q5TF21 947 aa33.53■■■□□ 2.96
CSNK1E-205ENST00000405675 RBM43Q6ZSC3 357 aaKnown RBP33.53■■■□□ 2.96
CSNK1E-205ENST00000405675 SHISA4Q96DD7 197 aa33.53■■■□□ 2.96
CSNK1E-205ENST00000405675 MKNK2Q9HBH9 465 aa33.53■■■□□ 2.96
CSNK1E-205ENST00000405675 RBM28Q9NW13 759 aaKnown RBP33.53■■■□□ 2.96
CSNK1E-205ENST00000405675 DDX60LQ5H9U9 1706 aaKnown RBP33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 SPTLC2O15270 562 aa33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 SNW1Q13573 536 aaKnown RBP33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 PKN1Q16512 942 aa33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 FSIP1Q8NA03 581 aa33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 KCNG4Q8TDN1 519 aa33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 hCG_1642624A0A1W2PR95 340 aa33.52■■■□□ 2.96
CSNK1E-205ENST00000405675 BTBD18B2RXH4 712 aa33.51■■■□□ 2.95
CSNK1E-205ENST00000405675 SF3A1Q15459 793 aaKnown RBP33.51■■■□□ 2.95
CSNK1E-205ENST00000405675 ADALQ6DHV7 355 aa33.51■■■□□ 2.95
CSNK1E-205ENST00000405675 TMTC3Q6ZXV5 915 aa33.51■■■□□ 2.95
CSNK1E-205ENST00000405675 LARGE2Q8N3Y3 721 aa33.51■■■□□ 2.95
CSNK1E-205ENST00000405675 ENGASEQ8NFI3 743 aa33.51■■■□□ 2.95
CSNK1E-205ENST00000405675 KIAA0825Q8IV33 1275 aa33.5■■■□□ 2.95
CSNK1E-205ENST00000405675 DIS3L2Q8IYB7 885 aaKnown RBP33.5■■■□□ 2.95
CSNK1E-205ENST00000405675 PRPF3O43395 683 aaKnown RBP33.5■■■□□ 2.95
CSNK1E-205ENST00000405675 FKBP1AP62942 108 aaKnown RBP33.5■■■□□ 2.95
CSNK1E-205ENST00000405675 V9GY48 417 aaPredicted RBP33.5■■■□□ 2.95
CSNK1E-205ENST00000405675 BRCA1P38398 1863 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-205ENST00000405675 RASA1P20936 1047 aa33.49■■■□□ 2.95
CSNK1E-205ENST00000405675 CCDC192P0DO97 292 aa33.49■■■□□ 2.95
CSNK1E-205ENST00000405675 CCDC73Q6ZRK6 1079 aa33.49■■■□□ 2.95
CSNK1E-205ENST00000405675 SRBD1Q8N5C6 995 aaKnown RBP33.49■■■□□ 2.95
CSNK1E-205ENST00000405675 MAP3K14Q99558 947 aa33.49■■■□□ 2.95
CSNK1E-205ENST00000405675 A0A1W2PQ27 194 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 A0A1W2PQ64 194 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 A0A1W2PQD8 194 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 SLC39A14Q15043 492 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 NOSTRINQ8IVI9 506 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 PDLIM2Q96JY6 352 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 BCS1LQ9Y276 419 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 COL4A5P29400 1685 aa33.48■■■□□ 2.95
CSNK1E-205ENST00000405675 AKAP17AQ02040 695 aaKnown RBP33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 FAM160A1Q05DH4 1040 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 CTCFLQ8NI51 663 aaPredicted RBP33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 MRPS27Q92552 414 aaKnown RBP33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 ANKS1AQ92625 1134 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 ZNF646O15015 1829 aaPredicted RBP33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 CNTNAP5Q8WYK1 1306 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 CDK8P49336 464 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 TYRO3Q06418 890 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 PTPAQ15257 358 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 SAFBQ15424 915 aaKnown RBP eCLIP33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 C16orf86Q6ZW13 317 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 DGKHQ86XP1 1220 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 ZNF444Q8N0Y2 327 aaPredicted RBP33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 NLGN2Q8NFZ4 835 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 OXER1Q8TDS5 423 aa33.47■■■□□ 2.95
CSNK1E-205ENST00000405675 TSPY3P0CV98 308 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 TSPY8P0CW00 308 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 NT5C2P49902 561 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 AXDND1Q5T1B0 1012 aaPredicted RBP33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 TEKT1Q969V4 418 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 VPS54Q9P1Q0 977 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 MRVI1Q9Y6F6 885 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 MYH6P13533 1939 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 MARCKSP29966 332 aaPredicted RBP33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 HHIPL2Q6UWX4 724 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 KAT14Q9H8E8 782 aa33.46■■■□□ 2.95
CSNK1E-205ENST00000405675 A0A1B0GVL5 298 aa33.45■■■□□ 2.95
CSNK1E-205ENST00000405675 WDHD1O75717 1129 aaPredicted RBP33.45■■■□□ 2.95
CSNK1E-205ENST00000405675 NR5A1Q13285 461 aa33.45■■■□□ 2.95
CSNK1E-205ENST00000405675 FOXP1Q9H334 677 aaPredicted RBP33.45■■■□□ 2.95
CSNK1E-205ENST00000405675 TCP11L1Q9NUJ3 509 aa33.45■■■□□ 2.95
CSNK1E-205ENST00000405675 CRKP46108 304 aa33.44■■■□□ 2.94
CSNK1E-205ENST00000405675 UVSSAQ2YD98 709 aa33.44■■■□□ 2.94
CSNK1E-205ENST00000405675 RTN4Q9NQC3 1192 aaKnown RBP33.44■■■□□ 2.94
CSNK1E-205ENST00000405675 ADAMTSL1Q8N6G6 1762 aa33.44■■■□□ 2.94
CSNK1E-205ENST00000405675 FMR1NBQ8N0W7 255 aaPredicted RBP33.44■■■□□ 2.94
CSNK1E-205ENST00000405675 VPS33BQ9H267 617 aa33.44■■■□□ 2.94
CSNK1E-205ENST00000405675 RAD17O75943 681 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 TOB1P50616 345 aaPredicted RBP33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 APOBEC3HQ6NTF7 200 aaKnown RBP33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 SPON1Q9HCB6 807 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 MYH1P12882 1939 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 NDUFA8P51970 172 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 PICALMQ13492 652 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 PNMA1Q8ND90 353 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 TAOK3Q9H2K8 898 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 PCDHAC2Q9Y5I4 1007 aa33.43■■■□□ 2.94
CSNK1E-205ENST00000405675 FOCADQ5VW36 1801 aa33.42■■■□□ 2.94
CSNK1E-205ENST00000405675 DDX4Q9NQI0 724 aaKnown RBP33.42■■■□□ 2.94
CSNK1E-205ENST00000405675 ILDR2Q71H61 639 aa33.41■■■□□ 2.94
CSNK1E-205ENST00000405675 USP40Q9NVE5 1235 aa33.41■■■□□ 2.94
CSNK1E-205ENST00000405675 NFKBIEO00221 500 aa33.41■■■□□ 2.94
CSNK1E-205ENST00000405675 KINO60870 393 aaKnown RBP33.41■■■□□ 2.94
CSNK1E-205ENST00000405675 PHF20Q9BVI0 1012 aa33.41■■■□□ 2.94
CSNK1E-205ENST00000405675 MRIQ9BWK5 157 aa33.41■■■□□ 2.94
CSNK1E-205ENST00000405675 ZDHHC15Q96MV8 337 aa33.4■■■□□ 2.94
CSNK1E-205ENST00000405675 ZNF287Q9HBT7 754 aa33.4■■■□□ 2.94
CSNK1E-205ENST00000405675 CCDC178Q5BJE1 867 aa33.4■■■□□ 2.94
CSNK1E-205ENST00000405675 CDC42EP5Q6NZY7 148 aa33.4■■■□□ 2.94
CSNK1E-205ENST00000405675 NIM1KQ8IY84 436 aa33.4■■■□□ 2.94
CSNK1E-205ENST00000405675 TRIM44Q96DX7 344 aaPredicted RBP33.4■■■□□ 2.94
CSNK1E-205ENST00000405675 PSMD14O00487 310 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms