RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 MB21D2Q8IYB1 491 aaPredicted RBP18.83■□□□□ 0.6
HMGA1-204ENST00000401473 CEP95Q96GE4 821 aa18.83■□□□□ 0.6
HMGA1-204ENST00000401473 NEK1Q96PY6 1258 aa18.83■□□□□ 0.6
HMGA1-204ENST00000401473 A0A1W2PRG0 241 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 SPDYE5A6NIY4 337 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 USP17L5A8MUK1 530 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 SLC10A3P09131 477 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 CPA1P15085 419 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 OTUD5Q96G74 571 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 C22orf23Q9BZE7 217 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 GINM1Q9NU53 330 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 AFG3L2Q9Y4W6 797 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 MCCP23508 829 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 ECE1P42892 770 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 ANTXR2P58335 489 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 PPATQ06203 517 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 SPRYD7Q5W111 196 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 ACER1Q8TDN7 264 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 KANSL2Q9H9L4 492 aa18.82■□□□□ 0.6
HMGA1-204ENST00000401473 WDR33Q9C0J8 1336 aaKnown RBP18.81■□□□□ 0.6
HMGA1-204ENST00000401473 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 AOC2O75106 756 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 SPP2Q13103 211 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 KRT32Q14532 448 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 RALYLQ86SE5 291 aaKnown RBP18.81■□□□□ 0.6
HMGA1-204ENST00000401473 CCDC102AQ96A19 550 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 WNK4Q96J92 1243 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 JAKMIP1Q96N16 626 aaKnown RBP18.81■□□□□ 0.6
HMGA1-204ENST00000401473 TCP11L1Q9NUJ3 509 aa18.81■□□□□ 0.6
HMGA1-204ENST00000401473 EEF2P13639 858 aaKnown RBP18.8■□□□□ 0.6
HMGA1-204ENST00000401473 NOVP48745 357 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 RBM25P49756 843 aaKnown RBP18.8■□□□□ 0.6
HMGA1-204ENST00000401473 IL17RAQ96F46 866 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 TCEANC2Q96MN5 208 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 KIF2CQ99661 725 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 ANAPC15P60006 121 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 EXOSC10Q01780 885 aaKnown RBP18.8■□□□□ 0.6
HMGA1-204ENST00000401473 ICA1Q05084 483 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 ZNF280CQ8ND82 737 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 WDR18Q9BV38 432 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
HMGA1-204ENST00000401473 TRIM75PA6NK02 468 aa18.79■□□□□ 0.6
HMGA1-204ENST00000401473 DGKZQ13574 1117 aa18.79■□□□□ 0.6
HMGA1-204ENST00000401473 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
HMGA1-204ENST00000401473 ZSCAN10Q96SZ4 725 aaPredicted RBP18.79■□□□□ 0.6
HMGA1-204ENST00000401473 LRRC2Q9BYS8 371 aa18.79■□□□□ 0.6
HMGA1-204ENST00000401473 GPHNQ9NQX3 736 aaPredicted RBP18.79■□□□□ 0.6
HMGA1-204ENST00000401473 MYH4Q9Y623 1939 aa18.79■□□□□ 0.6
HMGA1-204ENST00000401473 CASTP20810 708 aaKnown RBP18.78■□□□□ 0.6
HMGA1-204ENST00000401473 MCM5P33992 734 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 NT5C2P49902 561 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 PPIL2Q13356 520 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 DHX32Q7L7V1 743 aaKnown RBP18.78■□□□□ 0.6
HMGA1-204ENST00000401473 IQCA1Q86XH1 822 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 ENAHQ8N8S7 591 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-204ENST00000401473 MS4A4AQ96JQ5 239 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 TBC1D32Q96NH3 1257 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 SENP2Q9HC62 589 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 ZSWIM6Q9HCJ5 1215 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 STX8Q9UNK0 236 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 PTPRFP10586 1907 aa18.78■□□□□ 0.6
HMGA1-204ENST00000401473 PRC1O43663 620 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 TTLL1O95922 423 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 ATP2B2Q01814 1243 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 SEC23AQ15436 765 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 MKL1Q969V6 931 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 UPF3BQ9BZI7 483 aaKnown RBP18.77■□□□□ 0.6
HMGA1-204ENST00000401473 TM6SF1Q9BZW5 370 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 UPF2Q9HAU5 1272 aaKnown RBP18.77■□□□□ 0.6
HMGA1-204ENST00000401473 NYAP2Q9P242 653 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 KCNH4Q9UQ05 1017 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 TNKSO95271 1327 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 USP17L10C9JJH3 530 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 ZBTB48P10074 688 aaPredicted RBP18.77■□□□□ 0.6
HMGA1-204ENST00000401473 BACE1P56817 501 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 NOGQ13253 232 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 KIAA1755Q5JYT7 1200 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 TMX2Q9Y320 296 aa18.77■□□□□ 0.6
HMGA1-204ENST00000401473 PSMA5P28066 241 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 KIF23Q02241 960 aaPredicted RBP18.76■□□□□ 0.59
HMGA1-204ENST00000401473 MTMR2Q13614 643 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 RUFY3Q7L099 469 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 DGKHQ86XP1 1220 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 TTC14Q96N46 770 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 UBAC1Q9BSL1 405 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 AS3MTQ9HBK9 375 aa18.76■□□□□ 0.59
HMGA1-204ENST00000401473 CXCL11O14625 94 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 IFIT3O14879 490 aaKnown RBP18.75■□□□□ 0.59
HMGA1-204ENST00000401473 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
HMGA1-204ENST00000401473 RPS6KB1P23443 525 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 MOGSQ13724 837 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 ZYXQ15942 572 aaKnown RBP18.75■□□□□ 0.59
HMGA1-204ENST00000401473 ANKS1AQ92625 1134 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 KIAA1683Q9H0B3 1180 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 EMILIN3Q9NT22 766 aa18.75■□□□□ 0.59
HMGA1-204ENST00000401473 HMGCS2P54868 508 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms