RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 MAP3K5Q99683 1374 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 CRB1P82279 1406 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 GRM8O00222 908 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 TFRCP02786 760 aaKnown RBP15.35■□□□□ 0.05
RUNX3-203ENST00000399916 TCERG1LQ5VWI1 586 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 SELENOOQ9BVL4 669 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 TMEM165Q9HC07 324 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 CD2APQ9Y5K6 639 aa15.35■□□□□ 0.05
RUNX3-203ENST00000399916 KLF18A0A0U1RQI7 1052 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 POLA2Q14181 598 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 UHMK1Q8TAS1 419 aaKnown RBP15.34■□□□□ 0.05
RUNX3-203ENST00000399916 SETD1BQ9UPS6 1966 aaKnown RBP15.34■□□□□ 0.05
RUNX3-203ENST00000399916 ZRANB2O95218 330 aaKnown RBP eCLIP15.34■□□□□ 0.05
RUNX3-203ENST00000399916 SARM1Q6SZW1 724 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 LUC7LQ9NQ29 371 aaKnown RBP15.34■□□□□ 0.05
RUNX3-203ENST00000399916 CPS1P31327 1500 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 ERICH2A1L162 156 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 DIAPH2O60879 1101 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 KCNB1Q14721 858 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 MYD88Q99836 296 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 SEPT11Q9NVA2 429 aaKnown RBP15.34■□□□□ 0.05
RUNX3-203ENST00000399916 NEURL4Q96JN8 1562 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 PREX1Q8TCU6 1659 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 CRYMQ14894 314 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 FAM114A1Q8IWE2 563 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 LRRC59Q96AG4 307 aaKnown RBP15.34■□□□□ 0.05
RUNX3-203ENST00000399916 HMG20BQ9P0W2 317 aa15.34■□□□□ 0.05
RUNX3-203ENST00000399916 TSNAXIP1Q2TAA8 658 aa15.33■□□□□ 0.05
RUNX3-203ENST00000399916 SPATS2Q86XZ4 545 aaKnown RBP15.33■□□□□ 0.05
RUNX3-203ENST00000399916 ANKRD13CQ8N6S4 541 aa15.33■□□□□ 0.05
RUNX3-203ENST00000399916 SUCLG2Q96I99 432 aa15.33■□□□□ 0.05
RUNX3-203ENST00000399916 TAB2Q9NYJ8 693 aa15.33■□□□□ 0.05
RUNX3-203ENST00000399916 A6NNZ2 444 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 HOXC9P31274 260 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 IQCB1Q15051 598 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 TUBB8Q3ZCM7 444 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 NSMCE1Q8WV22 266 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 NSRP1Q9H0G5 558 aaKnown RBP15.33■□□□□ 0.04
RUNX3-203ENST00000399916 CASP14P31944 242 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 ST3GAL1Q11201 340 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 PROSER3Q2NL68 480 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 TRIM22Q8IYM9 498 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 RNF10Q8N5U6 811 aaKnown RBP15.33■□□□□ 0.04
RUNX3-203ENST00000399916 MORC4Q8TE76 937 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 DPF2Q92785 391 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 HDAC6Q9UBN7 1215 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 PIK3C2BO00750 1634 aa15.33■□□□□ 0.04
RUNX3-203ENST00000399916 H0Y3Z8 333 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 LGR5O75473 907 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 SNUPNO95149 360 aaKnown RBP15.32■□□□□ 0.04
RUNX3-203ENST00000399916 KRT83P78385 493 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 VSIG1Q86XK7 387 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 ROBO2Q9HCK4 1378 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 ATP5J2-PTCD1G3V325 749 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 PTCD1O75127 700 aaKnown RBP15.32■□□□□ 0.04
RUNX3-203ENST00000399916 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 KSR2Q6VAB6 950 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 SLC40A1Q9NP59 571 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 ETAA1Q9NY74 926 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
RUNX3-203ENST00000399916 CHGBP05060 677 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 PFKFB1P16118 471 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 EIF4A1P60842 406 aaKnown RBP15.32■□□□□ 0.04
RUNX3-203ENST00000399916 THEMIS2Q5TEJ8 643 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 ZNF365Q70YC5 407 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 NOA1Q8NC60 698 aaKnown RBP15.32■□□□□ 0.04
RUNX3-203ENST00000399916 NBPF3Q9H094 633 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
RUNX3-203ENST00000399916 ALKQ9UM73 1620 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
RUNX3-203ENST00000399916 TRAF1Q13077 416 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 KRT28Q7Z3Y7 464 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 CCDC25Q86WR0 208 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TRIM47Q96LD4 638 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 ALG1Q9BT22 464 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 GGT7Q9UJ14 662 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 LMTK3Q96Q04 1460 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 NUTM2BA6NNL0 878 aaPredicted RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 NUTM2EB1AL46 878 aaPredicted RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 POLR2DO15514 142 aaKnown RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 NR1D1P20393 614 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 EVA1CP58658 441 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TUBB2AQ13885 445 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TOB2Q14106 344 aaPredicted RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 ARHGEF2Q92974 986 aaKnown RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TUBB2BQ9BVA1 445 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TMEM94Q12767 1356 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 LRRIQ3A6PVS8 624 aaPredicted RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TOM1O60784 492 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 SLC39A6Q13433 755 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 TMED1Q13445 227 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 BEND6Q5SZJ8 279 aaPredicted RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 DZIP1Q86YF9 867 aaKnown RBP15.31■□□□□ 0.04
RUNX3-203ENST00000399916 IFT74Q96LB3 600 aa15.31■□□□□ 0.04
RUNX3-203ENST00000399916 ZCWPW1Q9H0M4 648 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms