RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 MAN1A1P33908 653 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 FAM160B1Q5W0V3 765 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 BRF1Q92994 677 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 HMG20BQ9P0W2 317 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 CEP85LQ5SZL2 805 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 XAB2Q9HCS7 855 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 UBN1Q9NPG3 1134 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 TXNDC9O14530 226 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 TLR3O15455 904 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 MIER3Q7Z3K6 550 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 RAD17O75943 681 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 KCNA6P17658 529 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 HSPA1LP34931 641 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 HSPA4P34932 840 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 PGBD3Q8N328 593 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 ZMAT2Q96NC0 199 aaKnown RBP12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 PNMA2Q9UL42 364 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 HSF2BPO75031 334 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 SEL1L2Q5TEA6 688 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 DCUN1D2Q6PH85 259 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 DPF3Q92784 378 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 TESK2Q96S53 571 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 PPP1R16BQ96T49 567 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 NCAPGQ9BPX3 1015 aa12.16□□□□□ -0.46
CACNA1C-216ENST00000399638 TRIM75PA6NK02 468 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 KDM5CP41229 1560 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 Q6ZUG5 572 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 PPP2R3CQ969Q6 453 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 TNNC2P02585 160 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 CYLC1P35663 651 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 SLC12A2P55011 1212 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 GABPB1Q06547 395 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 SCYL2Q6P3W7 929 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 TBC1D22AQ8WUA7 517 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 ZNF165P49910 485 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 MTIF3Q9H2K0 278 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 SH2D4BQ5SQS7 431 aa12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
CACNA1C-216ENST00000399638 NOLC1Q14978 699 aaKnown RBP eCLIP12.15□□□□□ -0.47
CACNA1C-216ENST00000399638 PPP1R12CQ9BZL4 782 aa12.15□□□□□ -0.47
CACNA1C-216ENST00000399638 TNFAIP3P21580 790 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 TBC1D9Q6ZT07 1266 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 RSRC2Q7L4I2 434 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 TPH2Q8IWU9 490 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 RNF217Q8TC41 542 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 CCDC171Q6TFL3 1326 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 ANXA13P27216 316 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 TXKP42681 527 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 TMTC4Q5T4D3 741 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 TRIM50Q86XT4 487 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 SPOPO43791 374 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 RNF219Q5W0B1 726 aaPredicted RBP12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 STMN2Q93045 179 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 OLA1Q9NTK5 396 aaKnown RBP12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 ADCY7P51828 1080 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 STX1AQ16623 288 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 ZNF174Q15697 407 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
CACNA1C-216ENST00000399638 RAPGEF6Q8TEU7 1601 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 TBC1D7Q9P0N9 293 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 GCNT3O95395 438 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 KRT81Q14533 505 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 EEPD1Q7L9B9 569 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 NLRP7Q8WX94 980 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 MBD5Q9P267 1494 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 TRAF5O00463 557 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 PTPREP23469 700 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 ALDH3A1P30838 453 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 POLGP54098 1239 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 UBE2HP62256 183 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 KRT222Q8N1A0 295 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 CCPG1Q9ULG6 757 aa12.13□□□□□ -0.47
CACNA1C-216ENST00000399638 ANKRD36BQ8N2N9 1353 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms