RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 PARD3BQ8TEW8 1205 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 NAP1L3Q99457 506 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 PARP2Q9UGN5 583 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 TEKT3Q9BXF9 490 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 ZFYVE16Q7Z3T8 1539 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 DBNDD2Q9BQY9 259 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 PIK3C2GO75747 1445 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 ELP1O95163 1332 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 ARPP19P56211 112 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 TNNC1P63316 161 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 DNM1Q05193 864 aaKnown RBP13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 UVSSAQ2YD98 709 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 FAM184BQ9ULE4 1060 aa13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 EDC4Q6P2E9 1401 aaKnown RBP13.4□□□□□ -0.26
CACNA1C-213ENST00000399629 SERPINB2P05120 415 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 AK2P54819 239 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 SLC12A2P55011 1212 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 RILPL1Q5EBL4 403 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 GANCQ8TET4 914 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 IFT81Q8WYA0 676 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 MRRFQ96E11 262 aaKnown RBP13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 SEC62Q99442 399 aaKnown RBP13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 ATP8A2Q9NTI2 1148 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.27
CACNA1C-213ENST00000399629 XPOTO43592 962 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 ZHX1Q9UKY1 873 aaPredicted RBP13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 OPA1O60313 960 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 LRRC47Q8N1G4 583 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 KLHDC4Q8TBB5 520 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 ZAP70P43403 619 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 BCAMP50895 628 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 CABP7Q86V35 215 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 ZSCAN30Q86W11 494 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 CCDC26Q8TAB7 109 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 NUP160Q12769 1436 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 ZNF365Q70YC5 407 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 IWS1Q96ST2 819 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 DNAJC25Q9H1X3 360 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 DACT1Q9NYF0 836 aa13.39□□□□□ -0.27
CACNA1C-213ENST00000399629 H0YCG3 227 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 TSPYL6Q8N831 410 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 SMCO2A6NFE2 343 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 DYNC1I1O14576 645 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 HOXD10P28358 340 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 PPARAQ07869 468 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 PSTPIP2Q9H939 334 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 LOC102724428A0A0B4J2F2 783 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 NOL3O60936 208 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 MYL3P08590 195 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 PTPREP23469 700 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 HSPA1LP34931 641 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 SIK1P57059 783 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 TSTA3Q13630 321 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 POLA2Q14181 598 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 SCYL2Q6P3W7 929 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 C1orf228Q6PIY5 440 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 NELFCDQ8IXH7 590 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 SKA2Q8WVK7 121 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 ADD3Q9UEY8 706 aaKnown RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 GYG1P46976 350 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 TAOK1Q7L7X3 1001 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 ANKS4BQ8N8V4 417 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 CCDC94Q9BW85 323 aaPredicted RBP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 DBNDD1Q9H9R9 158 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 XDHP47989 1333 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 ABCC2Q92887 1545 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 PFDN6O15212 129 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 PRR16Q569H4 304 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 ZNF449Q6P9G9 518 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 TACC3Q9Y6A5 838 aa13.38□□□□□ -0.27
CACNA1C-213ENST00000399629 RAD17O75943 681 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 SEPT12Q8IYM1 358 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 SUCLG2Q96I99 432 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 EPSTI1Q96J88 318 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 ELF1P32519 619 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 RTKN2Q8IZC4 609 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 UBLCP1Q8WVY7 318 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 TMEM106CQ9BVX2 250 aa13.37□□□□□ -0.27
CACNA1C-213ENST00000399629 SEPT10Q9P0V9 454 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms