RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 LIG1P18858 919 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 RASGRP2Q7LDG7 609 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 SHISA4Q96DD7 197 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 ZNF277Q9NRM2 450 aaPredicted RBP17.55■□□□□ 0.4
COL25A1-201ENST00000399126 KCNJ14Q9UNX9 436 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 KIF13BQ9NQT8 1826 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 STK36Q9NRP7 1315 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 FUT2Q10981 343 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 C16orf86Q6ZW13 317 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 SMAP1Q8IYB5 467 aaPredicted RBP17.55■□□□□ 0.4
COL25A1-201ENST00000399126 GRPEL1Q9HAV7 217 aa17.55■□□□□ 0.4
COL25A1-201ENST00000399126 RCAN1P53805 252 aa17.54■□□□□ 0.4
COL25A1-201ENST00000399126 ZFPM1Q8IX07 1006 aa17.54■□□□□ 0.4
COL25A1-201ENST00000399126 ZNF444Q8N0Y2 327 aaPredicted RBP17.54■□□□□ 0.4
COL25A1-201ENST00000399126 HHIPL2Q6UWX4 724 aa17.54■□□□□ 0.4
COL25A1-201ENST00000399126 CCDC196A0A1B0GTZ2 297 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 RBM5P52756 815 aaKnown RBP eCLIP17.53■□□□□ 0.4
COL25A1-201ENST00000399126 R3HDM1Q15032 1099 aaKnown RBP17.53■□□□□ 0.4
COL25A1-201ENST00000399126 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 PPP1R1BQ9UD71 204 aaPredicted RBP17.53■□□□□ 0.4
COL25A1-201ENST00000399126 CFAP45Q9UL16 551 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 STX8Q9UNK0 236 aa17.53■□□□□ 0.4
COL25A1-201ENST00000399126 DDAH1O94760 285 aa17.52■□□□□ 0.4
COL25A1-201ENST00000399126 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.4
COL25A1-201ENST00000399126 MYH8P13535 1937 aa17.52■□□□□ 0.4
COL25A1-201ENST00000399126 PKN1Q16512 942 aa17.52■□□□□ 0.39
COL25A1-201ENST00000399126 TMTC3Q6ZXV5 915 aa17.52■□□□□ 0.39
COL25A1-201ENST00000399126 PNMA1Q8ND90 353 aa17.52■□□□□ 0.39
COL25A1-201ENST00000399126 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.39
COL25A1-201ENST00000399126 RAD17O75943 681 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 TCP10Q12799 353 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 ZDHHC15Q96MV8 337 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 RCOR1Q9UKL0 485 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 DEXIO95424 95 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
COL25A1-201ENST00000399126 CLEC10AQ8IUN9 316 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 KCTD17Q8N5Z5 321 aa17.51■□□□□ 0.39
COL25A1-201ENST00000399126 OSBPL5Q9H0X9 879 aaPredicted RBP17.51■□□□□ 0.39
COL25A1-201ENST00000399126 GOLGA6L4A6NEF3 574 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 BTBD18B2RXH4 712 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 TRIM29Q14134 588 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CCDC183Q5T5S1 534 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CNTNAP5Q8WYK1 1306 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
COL25A1-201ENST00000399126 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 RBSNQ9H1K0 784 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CALM1P0DP23 149 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CALM2P0DP24 149 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CALM3P0DP25 149 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 MRE11P49959 708 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 OXER1Q8TDS5 423 aa17.5■□□□□ 0.39
COL25A1-201ENST00000399126 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
COL25A1-201ENST00000399126 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
COL25A1-201ENST00000399126 RNF26Q9BY78 433 aaPredicted RBP17.5■□□□□ 0.39
COL25A1-201ENST00000399126 FAM196BA6NMK8 535 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 GABPAQ06546 454 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 BRAPQ7Z569 592 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 BICD2Q8TD16 824 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 CEP95Q96GE4 821 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 MAP7D2Q96T17 732 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 RBM28Q9NW13 759 aaKnown RBP17.49■□□□□ 0.39
COL25A1-201ENST00000399126 DACT1Q9NYF0 836 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 PSME4Q14997 1843 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 PSDA5PKW4 1024 aaPredicted RBP17.49■□□□□ 0.39
COL25A1-201ENST00000399126 MMP1P03956 469 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 NR5A1Q13285 461 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 GNL2Q13823 731 aaKnown RBP17.49■□□□□ 0.39
COL25A1-201ENST00000399126 DIS3L2Q8IYB7 885 aaKnown RBP17.49■□□□□ 0.39
COL25A1-201ENST00000399126 RTKN2Q8IZC4 609 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 SIPA1L1O43166 1804 aa17.49■□□□□ 0.39
COL25A1-201ENST00000399126 NR1I2O75469 434 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 AKR1B1P15121 316 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 FKBP1AP62942 108 aaKnown RBP17.48■□□□□ 0.39
COL25A1-201ENST00000399126 CAMK4Q16566 473 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 WASF1Q92558 559 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 MTFR1LQ9H019 292 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 TCP11L1Q9NUJ3 509 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 RTEL1Q9NZ71 1219 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 FAM198AQ9UFP1 575 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
COL25A1-201ENST00000399126 U2AF2P26368 475 aaKnown RBP eCLIP17.48■□□□□ 0.39
COL25A1-201ENST00000399126 PPP2R5BQ15173 497 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 SLC35G1Q2M3R5 365 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
COL25A1-201ENST00000399126 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms