RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CCDC186Q7Z3E2 898 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 STK11IPQ8N1F8 1099 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 TRIML1Q8N9V2 468 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CNNM3Q8NE01 707 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 PYM1Q9BRP8 204 aaKnown RBP20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CD209Q9NNX6 404 aa20.33■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CCDC24Q8N4L8 307 aa20.32■□□□□ 0.84
HLA-DQB1-204ENST00000399084 AOPEPQ8N6M6 819 aa20.32■□□□□ 0.84
HLA-DQB1-204ENST00000399084 ZNF830Q96NB3 372 aaPredicted RBP20.32■□□□□ 0.84
HLA-DQB1-204ENST00000399084 LZTS2Q9BRK4 669 aa20.32■□□□□ 0.84
HLA-DQB1-204ENST00000399084 KAT14Q9H8E8 782 aa20.32■□□□□ 0.84
HLA-DQB1-204ENST00000399084 QTRT2Q9H974 415 aaKnown RBP20.32■□□□□ 0.84
HLA-DQB1-204ENST00000399084 GPR75-ASB3A0A0A6YYF3 556 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 PRDM1O75626 825 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 GALNT17Q6IS24 598 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CCDC82Q8N4S0 544 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 KCNF1Q9H3M0 494 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CABP5Q9NP86 173 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 DACH1Q9UI36 760 aa20.31■□□□□ 0.84
HLA-DQB1-204ENST00000399084 SCG2P13521 617 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 GPSM2P81274 684 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 PFKFB3Q16875 520 aaPredicted RBP20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 DPCR1Q3MIW9 517 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 NT5DC1Q5TFE4 455 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 OLFM4Q6UX06 510 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CNTNAP5Q8WYK1 1306 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 UFL1O94874 794 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 PTGS1P23219 599 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 RCSD1Q6JBY9 416 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 SP8Q8IXZ3 490 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 MKNK2Q9HBH9 465 aa20.3■□□□□ 0.84
HLA-DQB1-204ENST00000399084 FAM205AQ6ZU69 1335 aa20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 UBE2Q2LH0YL09 131 aa20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 MDM2Q00987 491 aaPredicted RBP20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 TFAP4Q01664 338 aa20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 NR5A1Q13285 461 aa20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 POTEAQ6S8J7 498 aa20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CLIC6Q96NY7 704 aa20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 R3HCC1Q9Y3T6 440 aaKnown RBP20.29■□□□□ 0.84
HLA-DQB1-204ENST00000399084 PLEKHA8P1O95397 391 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 SMARCA1P28370 1054 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 LONRF3Q496Y0 759 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CMTR1Q8N1G2 835 aaKnown RBP20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 SRBD1Q8N5C6 995 aaKnown RBP20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 MLKLQ8NB16 471 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 TNFRSF25Q93038 417 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 RTFDC1Q9BY42 306 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 OSBPL5Q9H0X9 879 aaPredicted RBP20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 VPS54Q9P1Q0 977 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 PCDHB6Q9Y5E3 794 aa20.28■□□□□ 0.84
HLA-DQB1-204ENST00000399084 CBFA2T2O43439 604 aa20.27■□□□□ 0.84
HLA-DQB1-204ENST00000399084 USP17L8P0C7I0 530 aa20.27■□□□□ 0.84
HLA-DQB1-204ENST00000399084 NLGN1Q8N2Q7 840 aa20.27■□□□□ 0.84
HLA-DQB1-204ENST00000399084 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
HLA-DQB1-204ENST00000399084 SH3RF3Q8TEJ3 882 aaPredicted RBP20.27■□□□□ 0.84
HLA-DQB1-204ENST00000399084 POLRMTO00411 1230 aaKnown RBP20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 MYL5Q02045 173 aa20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 GRM4Q14833 912 aa20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 FAM47AQ5JRC9 791 aa20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 METTL16Q86W50 562 aaKnown RBP20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 LRRC8AQ8IWT6 810 aa20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 OXER1Q8TDS5 423 aa20.27■□□□□ 0.83
HLA-DQB1-204ENST00000399084 GAKO14976 1311 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SMIM22K7EJ46 135 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SMC2O95347 1197 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TSPY3P0CV98 308 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TSPY8P0CW00 308 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 CYP2D6P10635 497 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SARSP49591 514 aaKnown RBP20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 POSTNQ15063 836 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TBC1D16Q8TBP0 767 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 COA1Q9GZY4 146 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 KCND1Q9NSA2 647 aa20.26■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NRDCO43847 1150 aa20.25■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NLRP5P59047 1200 aa20.25■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NCAPHQ15003 741 aa20.25■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ARL6IP4Q66PJ3 421 aaKnown RBP20.25■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PCDHA5Q9Y5H7 936 aa20.25■□□□□ 0.83
HLA-DQB1-204ENST00000399084 DYNC1I1O14576 645 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 MPNDQ8N594 471 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 CCDC148Q8NFR7 591 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SPATA20Q8TB22 786 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 IL17RBQ9NRM6 502 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PYCARDQ9ULZ3 195 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 PLSCR1O15162 318 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 BTDP43251 543 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ATP2C1P98194 919 aaPredicted RBP20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 NPY5RQ15761 445 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TTC38Q5R3I4 469 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 C16orf86Q6ZW13 317 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 CCDC150Q8NCX0 1101 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TGFBRAP1Q8WUH2 860 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ERCC4Q92889 916 aaPredicted RBP20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 SMARCE1Q969G3 411 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 TAOK2Q9UL54 1235 aa20.24■□□□□ 0.83
HLA-DQB1-204ENST00000399084 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms