RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 TRIM17Q9Y577 477 aa17.32■□□□□ 0.36
COL13A1-204ENST00000398975 HTTP42858 3142 aa17.32■□□□□ 0.36
COL13A1-204ENST00000398975 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
COL13A1-204ENST00000398975 PEX10O60683 326 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 APPP05067 770 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 SDSP20132 328 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 ZYXQ15942 572 aaKnown RBP17.31■□□□□ 0.36
COL13A1-204ENST00000398975 KIAA1755Q5JYT7 1200 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 KIAA1683Q9H0B3 1180 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 ASCC2Q9H1I8 757 aaPredicted RBP17.31■□□□□ 0.36
COL13A1-204ENST00000398975 CABP5Q9NP86 173 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 HELLSQ9NRZ9 838 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 HPS5Q9UPZ3 1129 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 TACC3Q9Y6A5 838 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 MGAMO43451 1857 aa17.31■□□□□ 0.36
COL13A1-204ENST00000398975 RASA1P20936 1047 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 TDO2P48775 406 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
COL13A1-204ENST00000398975 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 TMEM179Q6ZVK1 233 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 TRIM47Q96LD4 638 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 C12orf42Q96LP6 360 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 EFCC1Q9HA90 598 aa17.3■□□□□ 0.36
COL13A1-204ENST00000398975 HOXA7P31268 230 aaPredicted RBP17.29■□□□□ 0.36
COL13A1-204ENST00000398975 PKN2Q16513 984 aaKnown RBP17.29■□□□□ 0.36
COL13A1-204ENST00000398975 MCMDC2Q4G0Z9 681 aa17.29■□□□□ 0.36
COL13A1-204ENST00000398975 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
COL13A1-204ENST00000398975 AMOTL1Q8IY63 956 aa17.29■□□□□ 0.36
COL13A1-204ENST00000398975 TMOD4Q9NZQ9 345 aa17.29■□□□□ 0.36
COL13A1-204ENST00000398975 RLFQ13129 1914 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 PRDM1O75626 825 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 TICAM2Q86XR7 235 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 ANKRD13CQ8N6S4 541 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
COL13A1-204ENST00000398975 FEZ1Q99689 392 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 IL25Q9H293 177 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 INCENPQ9NQS7 918 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 PTPN22Q9Y2R2 807 aa17.28■□□□□ 0.36
COL13A1-204ENST00000398975 CCDC85CA6NKD9 419 aa17.27■□□□□ 0.36
COL13A1-204ENST00000398975 VCAM1P19320 739 aa17.27■□□□□ 0.36
COL13A1-204ENST00000398975 PSMC4P43686 418 aa17.27■□□□□ 0.36
COL13A1-204ENST00000398975 PPARAQ07869 468 aa17.27■□□□□ 0.36
COL13A1-204ENST00000398975 SMCR8Q8TEV9 937 aaPredicted RBP17.27■□□□□ 0.36
COL13A1-204ENST00000398975 NAPBQ9H115 298 aa17.27■□□□□ 0.36
COL13A1-204ENST00000398975 TXNRD2Q9NNW7 524 aa17.27■□□□□ 0.36
COL13A1-204ENST00000398975 DOCK3Q8IZD9 2030 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 HSPD1P10809 573 aaKnown RBP17.26■□□□□ 0.35
COL13A1-204ENST00000398975 ICA1Q05084 483 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 CTDSPL2Q05D32 466 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 ALX1Q15699 326 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 NACAP1Q9BZK3 213 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 PNMA3Q9UL41 463 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 PTCH2Q9Y6C5 1203 aa17.26■□□□□ 0.35
COL13A1-204ENST00000398975 IGKV6D-41A0A0C4DH26 115 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 FGAP02671 866 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 EEF2P13639 858 aaKnown RBP17.25■□□□□ 0.35
COL13A1-204ENST00000398975 OSBPP22059 807 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 HERVK_113P62684 666 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 PABPC4Q13310 644 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL13A1-204ENST00000398975 CWC27Q6UX04 472 aaKnown RBP17.25■□□□□ 0.35
COL13A1-204ENST00000398975 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 RBPJLQ9UBG7 517 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL13A1-204ENST00000398975 TMX2Q9Y320 296 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
COL13A1-204ENST00000398975 USP14P54578 494 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 IRX3P78415 501 aaPredicted RBP17.24■□□□□ 0.35
COL13A1-204ENST00000398975 FAM110CQ1W6H9 321 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 CATSPERGQ6ZRH7 1159 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 NKX2-3Q8TAU0 364 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 RPAP3Q9H6T3 665 aaPredicted RBP17.24■□□□□ 0.35
COL13A1-204ENST00000398975 MKNK2Q9HBH9 465 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 MORF4L1Q9UBU8 362 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 GABRQQ9UN88 632 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 PLXNB2O15031 1838 aa17.24■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 CNMDO75829 334 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 FMNL1O95466 1100 aaPredicted RBP17.23■□□□□ 0.35
COL13A1-204ENST00000398975 GCLCP48506 637 aaPredicted RBP17.23■□□□□ 0.35
COL13A1-204ENST00000398975 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 KIF22Q14807 665 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 FAM47AQ5JRC9 791 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 ANAPC4Q9UJX5 808 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 MYH4Q9Y623 1939 aa17.23■□□□□ 0.35
COL13A1-204ENST00000398975 Q3C1V9 767 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms