RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 CTAGE6Q86UF2 777 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 CTAGE4Q8IX94 777 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 DIS3L2Q8IYB7 885 aaKnown RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 ITFG2Q969R8 447 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 CCDC51Q96ER9 411 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 NAPGQ99747 312 aaPredicted RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 IFNAR1P17181 557 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 CASP14P31944 242 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 GUCY1A2P33402 732 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 ZC3H6P61129 1189 aaKnown RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 PIP4K2BP78356 416 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 NOM1Q5C9Z4 860 aaKnown RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 CDKAL1Q5VV42 579 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 CNGA4Q8IV77 575 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 CDC5LQ99459 802 aaKnown RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 FOXP1Q9H334 677 aaPredicted RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 MKRN1Q9UHC7 482 aaKnown RBP9.36□□□□□ -0.91
TCF4-203ENST00000398339 KCNJ14Q9UNX9 436 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 PCDHB6Q9Y5E3 794 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 ATRNO75882 1429 aa9.36□□□□□ -0.91
TCF4-203ENST00000398339 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
TCF4-203ENST00000398339 LIFRP42702 1097 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 MTA1Q13330 715 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 CUL4BQ13620 913 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 HSP90B2PQ58FF3 399 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 RINLQ6ZS11 566 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 TSHZ1Q6ZSZ6 1077 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 USP49Q70CQ1 688 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 GOLGA6L1Q8N7Z2 621 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 ACRBPQ8NEB7 543 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 CTAGE1Q96RT6 745 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 CSRNP2Q9H175 543 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 WWC3Q9ULE0 1092 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 SLC12A7Q9Y666 1083 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 SYNRGQ9UMZ2 1314 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 NUP188Q5SRE5 1749 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 SEMA3EO15041 775 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 ABL1P00519 1130 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 GYPCP04921 128 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 ARHGAP25P42331 645 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 MCAMP43121 646 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 FXR1P51114 621 aaKnown RBP eCLIP9.35□□□□□ -0.91
TCF4-203ENST00000398339 STX17P56962 302 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 FILIP1LQ4L180 1135 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 KLHL10Q6JEL2 608 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 ARMCX6Q7L4S7 300 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 TMTC1Q8IUR5 882 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 FBXO41Q8TF61 875 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 ACBD3Q9H3P7 528 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 MED4Q9NPJ6 270 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 MYO1AQ9UBC5 1043 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 ITIH6Q6UXX5 1313 aa9.35□□□□□ -0.91
TCF4-203ENST00000398339 LRRIQ3A6PVS8 624 aaPredicted RBP9.34□□□□□ -0.91
TCF4-203ENST00000398339 MAGEA9P43362 315 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 ERVK-24P63145 666 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 AMPD2Q01433 879 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 NID2Q14112 1375 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 UBE3CQ15386 1083 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 WDR93Q6P2C0 686 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 LRRC31Q6UY01 552 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 KRT28Q7Z3Y7 464 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 NOA1Q8NC60 698 aaKnown RBP9.34□□□□□ -0.91
TCF4-203ENST00000398339 INCENPQ9NQS7 918 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 TBC1D2BQ9UPU7 963 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 MST1RQ04912 1400 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 IFIT3O14879 490 aaKnown RBP9.34□□□□□ -0.91
TCF4-203ENST00000398339 A1BGP04217 495 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 NR5A1Q13285 461 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 ZC3H12AQ5D1E8 599 aaKnown RBP9.34□□□□□ -0.91
TCF4-203ENST00000398339 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 ANKRD23Q86SG2 305 aa9.34□□□□□ -0.91
TCF4-203ENST00000398339 PIH1D3Q9NQM4 214 aaKnown RBP9.34□□□□□ -0.91
TCF4-203ENST00000398339 ZNF532Q9HCE3 1301 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 A0A087X0B3 334 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 EIF3CLB5ME19 914 aaKnown RBP9.33□□□□□ -0.92
TCF4-203ENST00000398339 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 PHACTR2O75167 634 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 AFMP43652 599 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 TTF1Q15361 905 aaPredicted RBP9.33□□□□□ -0.92
TCF4-203ENST00000398339 TRIM22Q8IYM9 498 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 PAGE5Q96GU1 130 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 EIF3CQ99613 913 aaKnown RBP9.33□□□□□ -0.92
TCF4-203ENST00000398339 ISCA1Q9BUE6 129 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 FAM204AQ9H8W3 233 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 VIPAS39Q9H9C1 493 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 AATFQ9NY61 560 aaKnown RBP eCLIP9.33□□□□□ -0.92
TCF4-203ENST00000398339 ZSWIM5Q9P217 1185 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 MYO6Q9UM54 1294 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 TRPM3Q9HCF6 1732 aaPredicted RBP9.33□□□□□ -0.92
TCF4-203ENST00000398339 RIC1Q4ADV7 1423 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 PKD1L3Q7Z443 1732 aa9.33□□□□□ -0.92
TCF4-203ENST00000398339 MPHOSPH10O00566 681 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms