RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
PUM3-202ENST00000397885 PPP1R1BQ9UD71 204 aaPredicted RBP12.98□□□□□ -0.33
PUM3-202ENST00000397885 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 KDM3BQ7LBC6 1761 aa12.98□□□□□ -0.33
PUM3-202ENST00000397885 TTC36A6NLP5 189 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 KIAA1328Q86T90 577 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 TAX1BP1Q86VP1 789 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 SLC24A3Q9HC58 644 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 HOMER3Q9NSC5 361 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 QSER1Q2KHR3 1735 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 SPTLC2O15270 562 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 COL9A3Q14050 684 aaPredicted RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 TTC19Q6DKK2 380 aaPredicted RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 FAM43BQ6ZT52 329 aaPredicted RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 Q6ZUG5 572 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 CCDC51Q96ER9 411 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 CALR3Q96L12 384 aaKnown RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 TEX13AQ9BXU3 409 aaPredicted RBP12.97□□□□□ -0.33
PUM3-202ENST00000397885 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
PUM3-202ENST00000397885 ITGB4P16144 1822 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 PTPDC1A2A3K4 754 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 ZNF18P17022 549 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 FECHP22830 423 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 SLC35F6Q8N357 371 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 CCDC26Q8TAB7 109 aa12.96□□□□□ -0.33
PUM3-202ENST00000397885 DDX20Q9UHI6 824 aaKnown RBP12.96□□□□□ -0.33
PUM3-202ENST00000397885 FAM237AA0A1B0GTK4 181 aa12.96□□□□□ -0.34
PUM3-202ENST00000397885 CCNHP51946 323 aaPredicted RBP12.96□□□□□ -0.34
PUM3-202ENST00000397885 TRAF1Q13077 416 aa12.96□□□□□ -0.34
PUM3-202ENST00000397885 EMC10Q5UCC4 262 aa12.96□□□□□ -0.34
PUM3-202ENST00000397885 TCP11Q8WWU5 503 aa12.96□□□□□ -0.34
PUM3-202ENST00000397885 AKT1S1Q96B36 256 aa12.96□□□□□ -0.34
PUM3-202ENST00000397885 FAM227BQ96M60 508 aa12.96□□□□□ -0.34
PUM3-202ENST00000397885 PFKFB1P16118 471 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 RBBP5Q15291 538 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 PARP9Q8IXQ6 854 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 HOOK2Q96ED9 719 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 PLCD4Q9BRC7 762 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 SELENOOQ9BVL4 669 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 MTFR1LQ9H019 292 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 PES1O00541 588 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 NAP1L1P55209 391 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 AKAP17AQ02040 695 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 CKAP4Q07065 602 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 NR1I3Q14994 352 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 CCNI2Q6ZMN8 369 aaPredicted RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 CCDC13Q8IYE1 715 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 SIL1Q9H173 461 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 SLC40A1Q9NP59 571 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 HOOK1Q9UJC3 728 aaKnown RBP12.95□□□□□ -0.34
PUM3-202ENST00000397885 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 SAMM50Q9Y512 469 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
PUM3-202ENST00000397885 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 IPO7O95373 1038 aaKnown RBP12.94□□□□□ -0.34
PUM3-202ENST00000397885 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 PHKG2P15735 406 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 TEFQ10587 303 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 ZNF827Q17R98 1081 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 RSRC1Q96IZ7 334 aaKnown RBP12.94□□□□□ -0.34
PUM3-202ENST00000397885 PDGFDQ9GZP0 370 aaPredicted RBP12.94□□□□□ -0.34
PUM3-202ENST00000397885 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
PUM3-202ENST00000397885 DBF4Q9UBU7 674 aaPredicted RBP12.94□□□□□ -0.34
PUM3-202ENST00000397885 CLSTN1O94985 981 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 SYKP43405 635 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 MTF1Q14872 753 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 ALS2CLQ60I27 953 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 TRAPPC11Q7Z392 1133 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 AGXT2Q9BYV1 514 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 EPN3Q9H201 632 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 HPSEQ9Y251 543 aa12.94□□□□□ -0.34
PUM3-202ENST00000397885 TAF5LO75529 589 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 GCKP35557 465 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
PUM3-202ENST00000397885 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms