RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 RBPJLQ9UBG7 517 aa17.3■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L15C9J2P7 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L13C9JLJ4 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 CYP2B6P20813 491 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 SHMT1P34896 483 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 PLCD1P51178 756 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 TRIB2Q92519 343 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 KIAA1683Q9H0B3 1180 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
SNRNP25-203ENST00000397876 TRIOBPQ9H2D6 2365 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 EVI5O60447 810 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 XRCC5P13010 732 aaKnown RBP17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 VCAM1P19320 739 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 TRIM32Q13049 653 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 TRMT44Q8IYL2 757 aaKnown RBP17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 ANKLE1Q8NAG6 615 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 PAG1Q9NWQ8 432 aa17.28■□□□□ 0.36
SNRNP25-203ENST00000397876 TCRBV5S4A2TA0A5A2 114 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 ZKSCAN1P17029 563 aaPredicted RBP17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 RGS2P41220 211 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 CCNA1P78396 465 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 GABPAQ06546 454 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 GPR142Q7Z601 462 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 PLEKHH3Q7Z736 793 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 LCORLQ8N3X6 602 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 ACER1Q8TDN7 264 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 PAWRQ96IZ0 340 aaKnown RBP17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 PORCNQ9H237 461 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
SNRNP25-203ENST00000397876 MPHOSPH10O00566 681 aaKnown RBP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 GLRX3O76003 335 aaKnown RBP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 Q3C1V9 767 aa17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 CATSPERGQ6ZRH7 1159 aa17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 DIS3LQ8TF46 1054 aaKnown RBP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 EDC3Q96F86 508 aaKnown RBP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 APBA2Q99767 749 aa17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
SNRNP25-203ENST00000397876 ATP5JP18859 108 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 ADD2P35612 726 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 SEPT2Q15019 361 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 MORN1Q5T089 497 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 MAP3K21Q5TCX8 1036 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 USP6NLQ92738 828 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 RPAP3Q9H6T3 665 aaPredicted RBP17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 ARMT1Q9H993 441 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 RBM27Q9P2N5 1060 aaKnown RBP17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
SNRNP25-203ENST00000397876 CNMDO75829 334 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 MBD4O95243 580 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 WDR78Q5VTH9 848 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 POTEEQ6S8J3 1075 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 LBX2Q6XYB7 198 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 HAUS7Q99871 368 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 LRRCC1Q9C099 1032 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 NBPF3Q9H094 633 aa17.24■□□□□ 0.35
SNRNP25-203ENST00000397876 CYP2D6P10635 497 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 EVX2Q03828 476 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 MAP2K5Q13163 448 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 TMEM179Q6ZVK1 233 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 AMOTL1Q8IY63 956 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 ATP8A2Q9NTI2 1148 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 OGDHLQ9ULD0 1010 aa17.23■□□□□ 0.35
SNRNP25-203ENST00000397876 MYH8P13535 1937 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 ALPK3Q96L96 1907 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 CACNB2Q08289 660 aaPredicted RBP17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 CCL14Q16627 93 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 ZSCAN25Q6NSZ9 544 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 SLC44A5Q8NCS7 719 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 C11orf49Q9H6J7 331 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
SNRNP25-203ENST00000397876 MYH7P12883 1935 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 PRKAB2O43741 272 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 UBE3CQ15386 1083 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 TANGO6Q9C0B7 1094 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 PRO3102Q9H379 93 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 SH2D4AQ9H788 454 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 ARHGEF10LQ9HCE6 1279 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 BTBD7Q9P203 1132 aa17.21■□□□□ 0.35
SNRNP25-203ENST00000397876 PTPREP23469 700 aa17.2■□□□□ 0.34
SNRNP25-203ENST00000397876 COG2Q14746 738 aa17.2■□□□□ 0.34
SNRNP25-203ENST00000397876 SLFNL1Q499Z3 407 aa17.2■□□□□ 0.34
SNRNP25-203ENST00000397876 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms