RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 VCX3BQ9H321 246 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 KDRP35968 1356 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 ATP5JP18859 108 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 FBLN1P23142 703 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 SLC1A4P43007 532 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 EAPPQ56P03 285 aaPredicted RBP6.92□□□□□ -1.3
PGBD4-201ENST00000397766 CEP85LQ5SZL2 805 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 AKNAD1Q5T1N1 836 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 NELFBQ8WX92 580 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 TBC1D31Q96DN5 1066 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 DBNDD2Q9BQY9 259 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 MIS12Q9H081 205 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 RAB17Q9H0T7 212 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 SLC5A4Q9NY91 659 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 ERBB4Q15303 1308 aa6.92□□□□□ -1.3
PGBD4-201ENST00000397766 RASA3Q14644 834 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 MAGEF1Q9HAY2 307 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 BTG4Q9NY30 223 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 PBRM1Q86U86 1689 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 H0YIN7 160 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 VIMP08670 466 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 PCP11498 1178 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 PPFIA1Q13136 1202 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 WHAMMP3Q1A5X7 153 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 SLC17A8Q8NDX2 589 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 VPS16Q9H269 839 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 DNMT1P26358 1616 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 ZNF202O95125 648 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 KCNA6P17658 529 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 KRT9P35527 623 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 UTP14CQ5TAP6 766 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 CCDC62Q6P9F0 684 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 SLFN12Q8IYM2 578 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 RPUSD2Q8IZ73 545 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 TRIML1Q8N9V2 468 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 ZNF274Q96GC6 653 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 FAM114A2Q9NRY5 505 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 BLMP54132 1417 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 USP19O94966 1318 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 GIPC1O14908 333 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 EXOC3O60645 756 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 KLHL30Q0D2K2 578 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 FAM98CQ17RN3 349 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 HHATQ5VTY9 493 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 PPP1R21Q6ZMI0 780 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 CARD14Q9BXL6 1004 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 CASQ2O14958 399 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 DDAH1O94760 285 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 GABPB1Q06547 395 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 RPS6KA1Q15418 735 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 CEP57Q86XR8 500 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 CHURC1Q8WUH1 139 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 FAM89AQ96GI7 184 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 RUNDC3BQ96NL0 473 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 POLR2DO15514 142 aaKnown RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 ATF7P17544 494 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 MAGEA1P43355 309 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 PPARAQ07869 468 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 UAP1Q16222 522 aaPredicted RBP6.91□□□□□ -1.3
PGBD4-201ENST00000397766 TSNAXIP1Q2TAA8 658 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 CARD10Q9BWT7 1032 aa6.91□□□□□ -1.3
PGBD4-201ENST00000397766 YEATS2Q9ULM3 1422 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 LPXNO60711 386 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 TNFAIP1Q13829 316 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 HERC4Q5GLZ8 1057 aaPredicted RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 DCUN1D2Q6PH85 259 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 SUCLG2Q96I99 432 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 TRIM6Q9C030 488 aaPredicted RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 RASSF4Q9H2L5 321 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 PKD2L1Q9P0L9 805 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 PCDHB13Q9Y5F0 798 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 PRPF6O94906 941 aaKnown RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 GNPTABQ3T906 1256 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 RAB3IPQ96QF0 476 aaPredicted RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 SARNPP82979 210 aaKnown RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 SP4Q02446 784 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 GEN1Q17RS7 908 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 SH2D4BQ5SQS7 431 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 GKAP1Q5VSY0 366 aaPredicted RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 GBP6Q6ZN66 633 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 SPATS2Q86XZ4 545 aaKnown RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 SMAP1Q8IYB5 467 aaPredicted RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 REXO1Q8N1G1 1221 aaKnown RBP6.9□□□□□ -1.3
PGBD4-201ENST00000397766 ASIC3Q9UHC3 531 aa6.9□□□□□ -1.3
PGBD4-201ENST00000397766 HARSP12081 509 aaKnown RBP6.9□□□□□ -1.31
PGBD4-201ENST00000397766 PHLDB2Q86SQ0 1253 aa6.9□□□□□ -1.31
PGBD4-201ENST00000397766 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.31
PGBD4-201ENST00000397766 BBOF1Q8ND07 529 aa6.9□□□□□ -1.31
PGBD4-201ENST00000397766 CABLES1Q8TDN4 633 aa6.9□□□□□ -1.31
PGBD4-201ENST00000397766 PRPF31Q8WWY3 499 aaKnown RBP6.9□□□□□ -1.31
PGBD4-201ENST00000397766 HAUS7Q99871 368 aa6.9□□□□□ -1.31
PGBD4-201ENST00000397766 MRPL44Q9H9J2 332 aaKnown RBP6.9□□□□□ -1.31
PGBD4-201ENST00000397766 ZHX1Q9UKY1 873 aaPredicted RBP6.9□□□□□ -1.31
PGBD4-201ENST00000397766 ZNF532Q9HCE3 1301 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms