RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 SLC45A1Q9Y2W3 748 aa24.87■■□□□ 1.57
SEC13-207ENST00000397105 GPR25O00155 361 aa24.86■■□□□ 1.57
SEC13-207ENST00000397105 PRDM1O75626 825 aa24.86■■□□□ 1.57
SEC13-207ENST00000397105 USP14P54578 494 aa24.86■■□□□ 1.57
SEC13-207ENST00000397105 USP17L2Q6R6M4 530 aa24.86■■□□□ 1.57
SEC13-207ENST00000397105 DSCC1Q9BVC3 393 aa24.86■■□□□ 1.57
SEC13-207ENST00000397105 KANSL2Q9H9L4 492 aa24.86■■□□□ 1.57
SEC13-207ENST00000397105 LAMB1P07942 1786 aa24.85■■□□□ 1.57
SEC13-207ENST00000397105 PABPC4Q13310 644 aaKnown RBP eCLIP24.85■■□□□ 1.57
SEC13-207ENST00000397105 ACER1Q8TDN7 264 aa24.85■■□□□ 1.57
SEC13-207ENST00000397105 KIAA1683Q9H0B3 1180 aa24.85■■□□□ 1.57
SEC13-207ENST00000397105 CTDSPL2Q05D32 466 aa24.84■■□□□ 1.57
SEC13-207ENST00000397105 TREML2Q5T2D2 321 aa24.84■■□□□ 1.57
SEC13-207ENST00000397105 PARK7Q99497 189 aaKnown RBP24.84■■□□□ 1.57
SEC13-207ENST00000397105 CTNNA3Q9UI47 895 aa24.84■■□□□ 1.57
SEC13-207ENST00000397105 TLR2O60603 784 aa24.83■■□□□ 1.57
SEC13-207ENST00000397105 ICA1Q05084 483 aa24.83■■□□□ 1.57
SEC13-207ENST00000397105 IL25Q9H293 177 aa24.83■■□□□ 1.57
SEC13-207ENST00000397105 ARHGEF10LQ9HCE6 1279 aa24.83■■□□□ 1.57
SEC13-207ENST00000397105 EMILIN3Q9NT22 766 aa24.83■■□□□ 1.57
SEC13-207ENST00000397105 ATAD5Q96QE3 1844 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 ZNF213O14771 459 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 SGSM2O43147 1006 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 DGKZQ13574 1117 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 ZNF296Q8WUU4 475 aaPredicted RBP24.82■■□□□ 1.56
SEC13-207ENST00000397105 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.82■■□□□ 1.56
SEC13-207ENST00000397105 SH2D4AQ9H788 454 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 PNMA3Q9UL41 463 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 PHIPQ8WWQ0 1821 aa24.82■■□□□ 1.56
SEC13-207ENST00000397105 A0A1W2PRG0 241 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 FKTNO75072 461 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 TSPY3P0CV98 308 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 TSPY8P0CW00 308 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 CYP2C8P10632 490 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 OSBPP22059 807 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 HAND2P61296 217 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 ZYXQ15942 572 aaKnown RBP24.81■■□□□ 1.56
SEC13-207ENST00000397105 SIAH1Q8IUQ4 282 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 C12orf42Q96LP6 360 aa24.81■■□□□ 1.56
SEC13-207ENST00000397105 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.81■■□□□ 1.56
SEC13-207ENST00000397105 FGRP09769 529 aa24.8■■□□□ 1.56
SEC13-207ENST00000397105 PCP11498 1178 aaKnown RBP24.8■■□□□ 1.56
SEC13-207ENST00000397105 TFAP4Q01664 338 aa24.8■■□□□ 1.56
SEC13-207ENST00000397105 ATP2B2Q01814 1243 aa24.8■■□□□ 1.56
SEC13-207ENST00000397105 COL13A1Q5TAT6 717 aaPredicted RBP24.8■■□□□ 1.56
SEC13-207ENST00000397105 NEDD1Q8NHV4 660 aa24.8■■□□□ 1.56
SEC13-207ENST00000397105 INCENPQ9NQS7 918 aa24.8■■□□□ 1.56
SEC13-207ENST00000397105 ORC4O43929 436 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 EEF2P13639 858 aaKnown RBP24.79■■□□□ 1.56
SEC13-207ENST00000397105 HOXA7P31268 230 aaPredicted RBP24.79■■□□□ 1.56
SEC13-207ENST00000397105 SP3Q02447 781 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 IMMTQ16891 758 aaKnown RBP24.79■■□□□ 1.56
SEC13-207ENST00000397105 FAM47AQ5JRC9 791 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 CASC1Q6TDU7 716 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 MFSD6Q6ZSS7 791 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 CLEC10AQ8IUN9 316 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 SMCR8Q8TEV9 937 aaPredicted RBP24.79■■□□□ 1.56
SEC13-207ENST00000397105 RNF41Q9H4P4 317 aaPredicted RBP24.79■■□□□ 1.56
SEC13-207ENST00000397105 TMX2Q9Y320 296 aa24.79■■□□□ 1.56
SEC13-207ENST00000397105 RANBP6O60518 1105 aaKnown RBP24.78■■□□□ 1.56
SEC13-207ENST00000397105 AKNAD1Q5T1N1 836 aa24.78■■□□□ 1.56
SEC13-207ENST00000397105 KIAA1211Q6ZU35 1233 aa24.78■■□□□ 1.56
SEC13-207ENST00000397105 TOMM22Q9NS69 142 aa24.78■■□□□ 1.56
SEC13-207ENST00000397105 IGKV6D-41A0A0C4DH26 115 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 TSPY2A6NKD2 308 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 CDC45O75419 566 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 IRX3P78415 501 aaPredicted RBP24.77■■□□□ 1.56
SEC13-207ENST00000397105 C17orf99Q6UX52 265 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 ESYT1Q9BSJ8 1104 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 ASCC2Q9H1I8 757 aaPredicted RBP24.77■■□□□ 1.56
SEC13-207ENST00000397105 NYAP2Q9P242 653 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 CPA4Q9UI42 421 aa24.77■■□□□ 1.56
SEC13-207ENST00000397105 VCAM1P19320 739 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 PTH1RQ03431 593 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 RRP12Q5JTH9 1297 aaKnown RBP24.76■■□□□ 1.55
SEC13-207ENST00000397105 PPP4R3BQ5MIZ7 849 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 STAG1Q8WVM7 1258 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 LPAR1Q92633 364 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 ERO1AQ96HE7 468 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 NBPF3Q9H094 633 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 MTMR4Q9NYA4 1195 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 TACC3Q9Y6A5 838 aa24.76■■□□□ 1.55
SEC13-207ENST00000397105 U3KPZ7 1027 aaPredicted RBP24.76■■□□□ 1.55
SEC13-207ENST00000397105 USP17L15C9J2P7 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L13C9JLJ4 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L11C9JVI0 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L18D6R9N7 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L22D6RA61 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L17D6RBQ6 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L19D6RCP7 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L20D6RJB6 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 USP17L24Q0WX57 530 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 TBC1D10CQ8IV04 446 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 CEP95Q96GE4 821 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 GOPCQ9HD26 462 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 CLIP2Q9UDT6 1046 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 ADGRA2Q96PE1 1338 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 PLIN4Q96Q06 1357 aa24.75■■□□□ 1.55
SEC13-207ENST00000397105 TTLL1O95922 423 aa24.74■■□□□ 1.55
SEC13-207ENST00000397105 GCLCP48506 637 aaPredicted RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms