RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 TMEM179Q6ZVK1 233 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 SGMS1Q86VZ5 419 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 LDHDQ86WU2 507 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 MICU3Q86XE3 530 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 HOOK2Q96ED9 719 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
GAPDH-203ENST00000396858 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
GAPDH-203ENST00000396858 POLR2AP24928 1970 aaKnown RBP16.53■□□□□ 0.24
GAPDH-203ENST00000396858 GUCY1A2P33402 732 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 MAP3K10Q02779 954 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 ICA1Q05084 483 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 SEPT2Q15019 361 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 RASGRP2Q7LDG7 609 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
GAPDH-203ENST00000396858 NECAB1Q8N987 351 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 WRNIP1Q96S55 665 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 SH2B1Q9NRF2 756 aaPredicted RBP16.52■□□□□ 0.24
GAPDH-203ENST00000396858 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
GAPDH-203ENST00000396858 GOLGA8AA7E2F4 631 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 PHF20L1A8MW92 1017 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 TRAF5O00463 557 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 INPP5BP32019 993 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 CAP2P40123 477 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 ATP2B2Q01814 1243 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 CDC37L1Q7L3B6 337 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
GAPDH-203ENST00000396858 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 GTF3C6Q969F1 213 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 ZSCAN31Q96LW9 406 aaPredicted RBP16.51■□□□□ 0.23
GAPDH-203ENST00000396858 KAT14Q9H8E8 782 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 NCOA5Q9HCD5 579 aaKnown RBP16.51■□□□□ 0.23
GAPDH-203ENST00000396858 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 HPS5Q9UPZ3 1129 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 SLC12A7Q9Y666 1083 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 NID2Q14112 1375 aa16.51■□□□□ 0.23
GAPDH-203ENST00000396858 ZBTB43O43298 467 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 DTNBO60941 627 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 PDIA3P30101 505 aaKnown RBP16.5■□□□□ 0.23
GAPDH-203ENST00000396858 EVCP57679 992 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 CCT2P78371 535 aaKnown RBP16.5■□□□□ 0.23
GAPDH-203ENST00000396858 FMR1Q06787 632 aaKnown RBP eCLIP16.5■□□□□ 0.23
GAPDH-203ENST00000396858 DGKHQ86XP1 1220 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 TMEM47Q9BQJ4 181 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
GAPDH-203ENST00000396858 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 MTMR7Q9Y216 660 aa16.5■□□□□ 0.23
GAPDH-203ENST00000396858 PFKFB2O60825 505 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 DDAH1O94760 285 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 TTLL1O95922 423 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 NOVP48745 357 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 METAP2P50579 478 aaKnown RBP eCLIP16.49■□□□□ 0.231e-32■■■■□ 25.6
GAPDH-203ENST00000396858 SCRN1Q12765 414 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 CATIPQ7Z7H3 387 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 PNMA1Q8ND90 353 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 CHMP4CQ96CF2 233 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 GPBP1L1Q9HC44 474 aaPredicted RBP16.49■□□□□ 0.23
GAPDH-203ENST00000396858 DAXXQ9UER7 740 aaPredicted RBP16.49■□□□□ 0.23
GAPDH-203ENST00000396858 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
GAPDH-203ENST00000396858 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
GAPDH-203ENST00000396858 TOP1P11387 765 aaKnown RBP16.48■□□□□ 0.23
GAPDH-203ENST00000396858 EEF2P13639 858 aaKnown RBP16.48■□□□□ 0.23
GAPDH-203ENST00000396858 NF2P35240 595 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 CUL4AQ13619 759 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 SCYL3Q8IZE3 742 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.23
GAPDH-203ENST00000396858 ANKS1AQ92625 1134 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 KLRG1Q96E93 195 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
GAPDH-203ENST00000396858 ZNF408Q9H9D4 720 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 CLIP2Q9UDT6 1046 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 ZNF112Q9UJU3 913 aa16.48■□□□□ 0.23
GAPDH-203ENST00000396858 CTNND1O60716 968 aaKnown RBP16.47■□□□□ 0.23
GAPDH-203ENST00000396858 ASNSP08243 561 aa16.47■□□□□ 0.23
GAPDH-203ENST00000396858 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
GAPDH-203ENST00000396858 RTN1Q16799 776 aa16.47■□□□□ 0.23
GAPDH-203ENST00000396858 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
GAPDH-203ENST00000396858 TMTC2Q8N394 836 aa16.47■□□□□ 0.23
GAPDH-203ENST00000396858 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
GAPDH-203ENST00000396858 KANSL2Q9H9L4 492 aa16.47■□□□□ 0.23
GAPDH-203ENST00000396858 USP2O75604 605 aaPredicted RBP16.46■□□□□ 0.23
GAPDH-203ENST00000396858 CDC27P30260 824 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 TROAPQ12815 778 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 VGLL4Q14135 290 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 PPP4R3BQ5MIZ7 849 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 NOL9Q5SY16 702 aaKnown RBP16.46■□□□□ 0.23
GAPDH-203ENST00000396858 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 ACER1Q8TDN7 264 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.46■□□□□ 0.23
GAPDH-203ENST00000396858 NYAP2Q9P242 653 aa16.46■□□□□ 0.23
GAPDH-203ENST00000396858 PPP1R12BO60237 982 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms