RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
NDUFA9-202ENST00000396655 BRCA2P51587 3418 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 PATL2C9JE40 543 aaKnown RBP13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 PSMC4P43686 418 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 CAP1Q01518 475 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 FAM110CQ1W6H9 321 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 SLC4A8Q2Y0W8 1093 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 NBPF11Q86T75 865 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 CHD1LQ86WJ1 897 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 GTF3C2Q8WUA4 911 aaPredicted RBP13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 ASCC2Q9H1I8 757 aaPredicted RBP13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 SRRDQ9UH36 339 aa13.3□□□□□ -0.28
NDUFA9-202ENST00000396655 KIAA0100Q14667 2235 aaKnown RBP13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 BAZ2AQ9UIF9 1905 aaKnown RBP13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 GPAA1O43292 621 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 IGHDP01880 384 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 CHGBP05060 677 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 FCGRTP55899 365 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 RAB3GAP1Q15042 981 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 TRIM47Q96LD4 638 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 NACAP1Q9BZK3 213 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 ZNF287Q9HBT7 754 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 EMILIN3Q9NT22 766 aa13.29□□□□□ -0.28
NDUFA9-202ENST00000396655 GUCY1A2P33402 732 aa13.28□□□□□ -0.28
NDUFA9-202ENST00000396655 CDK8P49336 464 aa13.28□□□□□ -0.28
NDUFA9-202ENST00000396655 IRX3P78415 501 aaPredicted RBP13.28□□□□□ -0.28
NDUFA9-202ENST00000396655 SHROOM1Q2M3G4 852 aaPredicted RBP13.28□□□□□ -0.28
NDUFA9-202ENST00000396655 LNPKQ9C0E8 428 aa13.28□□□□□ -0.28
NDUFA9-202ENST00000396655 MORF4L1Q9UBU8 362 aa13.28□□□□□ -0.28
NDUFA9-202ENST00000396655 USP17L15C9J2P7 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L13C9JLJ4 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L11C9JVI0 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L18D6R9N7 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L22D6RA61 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L17D6RBQ6 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L19D6RCP7 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L20D6RJB6 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 FMNL1O95466 1100 aaPredicted RBP13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 CYP2D6P10635 497 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 USP17L24Q0WX57 530 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 SEPT2Q15019 361 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 LBX2Q6XYB7 198 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 ARHGAP39Q9C0H5 1083 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 SH2D4AQ9H788 454 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 KANSL2Q9H9L4 492 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 HELLSQ9NRZ9 838 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 ROBO3Q96MS0 1386 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 SZT2Q5T011 3432 aa13.27□□□□□ -0.29
NDUFA9-202ENST00000396655 MPHOSPH10O00566 681 aaKnown RBP13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 CEP290O15078 2479 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 MYH8P13535 1937 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 CTGFP29279 349 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 HERVK_113P62684 666 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 IRF5Q13568 498 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 SLC9C1Q4G0N8 1177 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 PLEKHM2Q8IWE5 1019 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 IFNL3Q8IZI9 196 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 ANKRD13CQ8N6S4 541 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 LPAR1Q92633 364 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 DYNLL2Q96FJ2 89 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 ZNF333Q96JL9 665 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 P2RX7Q99572 595 aaKnown RBP13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 FEZ1Q99689 392 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 TMX2Q9Y320 296 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
NDUFA9-202ENST00000396655 MGAMO43451 1857 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 M0R2C6 588 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 APPP05067 770 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 CAPN2P17655 700 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 TDO2P48775 406 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 EVX2Q03828 476 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 B4GALNT3Q6L9W6 998 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 CATSPERGQ6ZRH7 1159 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 SIAH1Q8IUQ4 282 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 SLC44A5Q8NCS7 719 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 ACER1Q8TDN7 264 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 PXYLP1Q8TE99 480 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 COA7Q96BR5 231 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 ARHGEF10LQ9HCE6 1279 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 HOXC10Q9NYD6 342 aa13.25□□□□□ -0.29
NDUFA9-202ENST00000396655 MYPNQ86TC9 1320 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 CYP2D7A0A087X1C5 515 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 A0A1W2PRG0 241 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 TNPO2O14787 897 aaKnown RBP13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 SLC3A2P08195 630 aaKnown RBP13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 VCAM1P19320 739 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 ALX1Q15699 326 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 MKNK2Q9HBH9 465 aa13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 EPB41L4AQ9HCS5 686 aaPredicted RBP13.24□□□□□ -0.29
NDUFA9-202ENST00000396655 RBPJLQ9UBG7 517 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms