RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 GRM1Q13255 1194 aa25.11■■□□□ 1.61
FXN-202ENST00000396364 SNAPC2Q13487 334 aa25.11■■□□□ 1.61
FXN-202ENST00000396364 NEK1Q96PY6 1258 aa25.11■■□□□ 1.61
FXN-202ENST00000396364 TCP11L1Q9NUJ3 509 aa25.11■■□□□ 1.61
FXN-202ENST00000396364 GREB1LQ9C091 1923 aaPredicted RBP25.11■■□□□ 1.61
FXN-202ENST00000396364 C19orf81C9J6K1 198 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 TTLL1O95922 423 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 MCM5P33992 734 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 USP14P54578 494 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 CYP4F22Q6NT55 531 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 NYAP2Q9P242 653 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 AFG3L2Q9Y4W6 797 aa25.1■■□□□ 1.61
FXN-202ENST00000396364 MANSC4A6NHS7 340 aaPredicted RBP25.09■■□□□ 1.61
FXN-202ENST00000396364 USP17L10C9JJH3 530 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 INHBEP58166 350 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 JAG1P78504 1218 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 ATP2B2Q01814 1243 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 SPP2Q13103 211 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 TTC14Q96N46 770 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 MTMR4Q9NYA4 1195 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 ZSWIM5Q9P217 1185 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 SYNPO2Q9UMS6 1093 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 STX8Q9UNK0 236 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 SNX14Q9Y5W7 946 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 TACC3Q9Y6A5 838 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 PHIPQ8WWQ0 1821 aa25.09■■□□□ 1.61
FXN-202ENST00000396364 TRIM75PA6NK02 468 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 IRF6O14896 467 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 SEC24BO95487 1268 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 CETPP11597 493 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 GUCY1A2P33402 732 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 SREBF2Q12772 1141 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 CEP95Q96GE4 821 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 MTA3Q9BTC8 594 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 BACH2Q9BYV9 841 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 TMOD4Q9NZQ9 345 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 KCNH4Q9UQ05 1017 aa25.08■■□□□ 1.61
FXN-202ENST00000396364 WDR33Q9C0J8 1336 aaKnown RBP25.08■■□□□ 1.6
FXN-202ENST00000396364 IGKV6D-41A0A0C4DH26 115 aa25.07■■□□□ 1.6
FXN-202ENST00000396364 EEF2P13639 858 aaKnown RBP25.07■■□□□ 1.6
FXN-202ENST00000396364 SHROOM1Q2M3G4 852 aaPredicted RBP25.07■■□□□ 1.6
FXN-202ENST00000396364 STOX1Q6ZVD7 989 aa25.07■■□□□ 1.6
FXN-202ENST00000396364 FASTKD5Q7L8L6 764 aaKnown RBP25.07■■□□□ 1.6
FXN-202ENST00000396364 RASEFQ8IZ41 740 aa25.07■■□□□ 1.6
FXN-202ENST00000396364 CNKSR2Q8WXI2 1034 aa25.07■■□□□ 1.6
FXN-202ENST00000396364 JAKMIP1Q96N16 626 aaKnown RBP25.07■■□□□ 1.6
FXN-202ENST00000396364 ZSCAN10Q96SZ4 725 aaPredicted RBP25.07■■□□□ 1.6
FXN-202ENST00000396364 GOPCQ9HD26 462 aa25.07■■□□□ 1.6
FXN-202ENST00000396364 MYH4Q9Y623 1939 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 FAM155AB1AL88 458 aaPredicted RBP25.06■■□□□ 1.6
FXN-202ENST00000396364 MAP2K2P36507 400 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 BACE1P56817 501 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 HTRA3P83110 453 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 MKRN3Q13064 507 aaKnown RBP25.06■■□□□ 1.6
FXN-202ENST00000396364 BLOC1S2Q6QNY1 142 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 USP17L2Q6R6M4 530 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 DGKHQ86XP1 1220 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.06■■□□□ 1.6
FXN-202ENST00000396364 KIAA1683Q9H0B3 1180 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.06■■□□□ 1.6
FXN-202ENST00000396364 CLIP2Q9UDT6 1046 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 TAF6LQ9Y6J9 622 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 WDR19Q8NEZ3 1342 aa25.06■■□□□ 1.6
FXN-202ENST00000396364 MTMR2Q13614 643 aa25.05■■□□□ 1.6
FXN-202ENST00000396364 OTUD7BQ6GQQ9 843 aa25.05■■□□□ 1.6
FXN-202ENST00000396364 CCDC84Q86UT8 332 aaPredicted RBP25.05■■□□□ 1.6
FXN-202ENST00000396364 MB21D2Q8IYB1 491 aaPredicted RBP25.05■■□□□ 1.6
FXN-202ENST00000396364 TMEM87BQ96K49 555 aa25.05■■□□□ 1.6
FXN-202ENST00000396364 C22orf23Q9BZE7 217 aa25.05■■□□□ 1.6
FXN-202ENST00000396364 TMX2Q9Y320 296 aa25.05■■□□□ 1.6
FXN-202ENST00000396364 A0A0G2JLL6 359 aaPredicted RBP25.04■■□□□ 1.6
FXN-202ENST00000396364 IFIT3O14879 490 aaKnown RBP25.04■■□□□ 1.6
FXN-202ENST00000396364 GJA5P36382 358 aa25.04■■□□□ 1.6
FXN-202ENST00000396364 VEGFBP49765 207 aa25.04■■□□□ 1.6
FXN-202ENST00000396364 DHX32Q7L7V1 743 aaKnown RBP25.04■■□□□ 1.6
FXN-202ENST00000396364 PRRT2Q7Z6L0 340 aaPredicted RBP25.04■■□□□ 1.6
FXN-202ENST00000396364 MKL1Q969V6 931 aa25.04■■□□□ 1.6
FXN-202ENST00000396364 TM6SF1Q9BZW5 370 aa25.04■■□□□ 1.6
FXN-202ENST00000396364 IL17RBQ9NRM6 502 aa25.04■■□□□ 1.6
FXN-202ENST00000396364 TNKSO95271 1327 aa25.04■■□□□ 1.6
FXN-202ENST00000396364 CCL15-CCL14A0A0B4J2E2 113 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 PRC1O43663 620 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 TOP1P11387 765 aaKnown RBP25.03■■□□□ 1.6
FXN-202ENST00000396364 FGD1P98174 961 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.62e-6■□□□□ 10
FXN-202ENST00000396364 CCL15Q16663 113 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 SH3D19Q5HYK7 790 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 TMTC2Q8N394 836 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 PROCA1Q8NCQ7 364 aaPredicted RBP25.03■■□□□ 1.6
FXN-202ENST00000396364 LPAR1Q92633 364 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 ZKSCAN3Q9BRR0 538 aa25.03■■□□□ 1.6
FXN-202ENST00000396364 PTPRFP10586 1907 aa25.02■■□□□ 1.6
FXN-202ENST00000396364 NMT2O60551 498 aa25.02■■□□□ 1.6
FXN-202ENST00000396364 CASTP20810 708 aaKnown RBP25.02■■□□□ 1.6
FXN-202ENST00000396364 WTAPQ15007 396 aa25.02■■□□□ 1.6
FXN-202ENST00000396364 ADCK5Q3MIX3 580 aa25.02■■□□□ 1.6
FXN-202ENST00000396364 IFIT1BQ5T764 474 aaKnown RBP25.02■■□□□ 1.6
FXN-202ENST00000396364 CYB5R4Q7L1T6 521 aa25.02■■□□□ 1.6
FXN-202ENST00000396364 CLEC10AQ8IUN9 316 aa25.02■■□□□ 1.6
FXN-202ENST00000396364 KAT14Q9H8E8 782 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms