RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 BCAMP50895 628 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 TXNRD1Q16881 649 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 NUP133Q8WUM0 1156 aa16.02■□□□□ 0.16
CCHCR1-203ENST00000396268 MYO5AQ9Y4I1 1855 aaKnown RBP16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 LRP5O75197 1615 aa16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 FAM237AA0A1B0GTK4 181 aa16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 SASH3O75995 380 aa16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 PRR29P0C7W0 189 aa16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 TNNT3P45378 269 aaPredicted RBP16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.156e-7■■□□□ 13.9
CCHCR1-203ENST00000396268 EPB41L4AQ9HCS5 686 aaPredicted RBP16.02■□□□□ 0.15
CCHCR1-203ENST00000396268 VWA3AA6NCI4 1184 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 NR5A1Q13285 461 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 ZNF772Q68DY9 489 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 MFSD6Q6ZSS7 791 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 WASF1Q92558 559 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 PATL2C9JE40 543 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 CASQ1P31415 396 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 TDO2P48775 406 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 RTN1Q16799 776 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 SRRTQ9BXP5 876 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 LCMT1Q9UIC8 334 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 PARP3Q9Y6F1 533 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 AKAP11Q9UKA4 1901 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 MROH5Q6ZUA9 1318 aa16.01■□□□□ 0.15
CCHCR1-203ENST00000396268 PRKAB2O43741 272 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 MMP1P03956 469 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 LIFRP42702 1097 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 WDR24Q96S15 920 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 DESI2Q9BSY9 194 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 FEZ2Q9UHY8 353 aaPredicted RBP16■□□□□ 0.15
CCHCR1-203ENST00000396268 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 TADA3O75528 432 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 APBA3O96018 575 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 UQCRFS1P1P0C7P4 283 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 GYS1P13807 737 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 IFNAR1P17181 557 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 KLRK1P26718 216 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 MAP3K12Q12852 859 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 SKIDA1Q1XH10 827 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 POTEAQ6S8J7 498 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 TOGARAM2Q6ZUX3 1019 aa16■□□□□ 0.15
CCHCR1-203ENST00000396268 TCRBV5S4A2TA0A5A2 114 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 ERICH2A1L162 156 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 WTAPQ15007 396 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 SART3Q15020 963 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 AKNAD1Q5T1N1 836 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 TMEM139Q8IV31 216 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 RGS22Q8NE09 1264 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 LPIN2Q92539 896 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 SAMSN1Q9NSI8 373 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 LAMB2P55268 1798 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 MYO1BO43795 1136 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 KARSQ15046 597 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 KLHL10Q6JEL2 608 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 SPATA5Q8NB90 893 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 DACH1Q9UI36 760 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 EFCAB8A8MWE9 144 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 PTPREP23469 700 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 LMAN1P49257 510 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 RASGRF1Q13972 1273 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 RILPL1Q5EBL4 403 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 TPTE2Q6XPS3 522 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 ANKRD18AQ8IVF6 992 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 CABP5Q9NP86 173 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 FBXO2Q9UK22 296 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 TACC3Q9Y6A5 838 aa15.99■□□□□ 0.15
CCHCR1-203ENST00000396268 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 RXRBP28702 533 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 GYG1P46976 350 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 SLC10A5Q5PT55 438 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 TC2NQ8N9U0 490 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 IPO4Q8TEX9 1081 aaKnown RBP15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 NLRP3Q96P20 1036 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 KRT23Q9C075 422 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 CNNM2Q9H8M5 875 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 STX10O60499 249 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 ARID4AP29374 1257 aaPredicted RBP15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 TM4SF1P30408 202 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 MIGA1Q8NAN2 632 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 OXER1Q8TDS5 423 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 MINPP1Q9UNW1 487 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 SLC4A4Q9Y6R1 1079 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 STK36Q9NRP7 1315 aa15.98■□□□□ 0.15
CCHCR1-203ENST00000396268 UTRNP46939 3433 aa15.97■□□□□ 0.15
CCHCR1-203ENST00000396268 TULP2O00295 520 aa15.97■□□□□ 0.15
CCHCR1-203ENST00000396268 SMC1AQ14683 1233 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 523 ms