RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 MANSC4A6NHS7 340 aaPredicted RBP11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 TSPY2A6NKD2 308 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 TSPY3P0CV98 308 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 TSPY8P0CW00 308 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 ICA1Q05084 483 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 PDE4BQ07343 736 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 KIAA1211Q6ZU35 1233 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
THUMPD1-202ENST00000396083 DNAH12Q6ZR08 3092 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 CDC45O75419 566 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 TAF1CQ15572 869 aaPredicted RBP11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 CETPP11597 493 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 CRHR2Q13324 411 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 CHST3Q7LGC8 479 aa11.98□□□□□ -0.49
THUMPD1-202ENST00000396083 NEDD4P46934 1319 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 PTPRFP10586 1907 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 PDHXO00330 501 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 SLC3A2P08195 630 aaKnown RBP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 EEF2P13639 858 aaKnown RBP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 BACE1P56817 501 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 MFSD6Q6ZSS7 791 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 RASGRP2Q7LDG7 609 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 LRRC47Q8N1G4 583 aaKnown RBP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 PHIPQ8WWQ0 1821 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 B4E1Z4 1266 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 CYP21A2P08686 494 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 TM4SF4P48230 202 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 COL9A3Q14050 684 aaPredicted RBP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 IMMTQ16891 758 aaKnown RBP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 TMEM179Q6ZVK1 233 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 CLIP2Q9UDT6 1046 aa11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 RBM8AQ9Y5S9 174 aaKnown RBP11.97□□□□□ -0.49
THUMPD1-202ENST00000396083 LAMB1P07942 1786 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 KDM4AO75164 1064 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 KIAA1755Q5JYT7 1200 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 SIAH1Q8IUQ4 282 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 SMCR8Q8TEV9 937 aaPredicted RBP11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 DSCC1Q9BVC3 393 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 AS3MTQ9HBK9 375 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 CPA4Q9UI42 421 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 KCNH4Q9UQ05 1017 aa11.96□□□□□ -0.49
THUMPD1-202ENST00000396083 A0A0G2JLL6 359 aaPredicted RBP11.96□□□□□ -0.5
THUMPD1-202ENST00000396083 UNCXA6NJT0 531 aa11.96□□□□□ -0.5
THUMPD1-202ENST00000396083 AKNAD1Q5T1N1 836 aa11.96□□□□□ -0.5
THUMPD1-202ENST00000396083 PRRT2Q7Z6L0 340 aaPredicted RBP11.96□□□□□ -0.5
THUMPD1-202ENST00000396083 NUP88Q99567 741 aaPredicted RBP11.96□□□□□ -0.5
THUMPD1-202ENST00000396083 MOGSQ13724 837 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 EMILIN3Q9NT22 766 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 TMOD4Q9NZQ9 345 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 RAD50Q92878 1312 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 CXCL11O14625 94 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 ALX1Q15699 326 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 OTUD7BQ6GQQ9 843 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 CCDC17Q96LX7 622 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 LSG1Q9H089 658 aaKnown RBP11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 ZNF287Q9HBT7 754 aa11.95□□□□□ -0.5
THUMPD1-202ENST00000396083 ROBO3Q96MS0 1386 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 INHBEP58166 350 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 TANGO6Q9C0B7 1094 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 DOCK3Q8IZD9 2030 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 VCAM1P19320 739 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 TCEANC2Q96MN5 208 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 KANSL2Q9H9L4 492 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 CTNNA3Q9UI47 895 aa11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 BAZ2BQ9UIF8 2168 aaKnown RBP11.94□□□□□ -0.5
THUMPD1-202ENST00000396083 HSPA8P11142 646 aaKnown RBP11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 FASTKD5Q7L8L6 764 aaKnown RBP11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 ANKRD13CQ8N6S4 541 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 ZNF296Q8WUU4 475 aaPredicted RBP11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 PAGR1Q9BTK6 254 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 WDR18Q9BV38 432 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 ARHGEF10LQ9HCE6 1279 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 MYH4Q9Y623 1939 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 KIAA0100Q14667 2235 aaKnown RBP11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 STOX1Q6ZVD7 989 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 LRRC2Q9BYS8 371 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 FBXO28Q9NVF7 368 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 MTMR4Q9NYA4 1195 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 ZSWIM5Q9P217 1185 aa11.93□□□□□ -0.5
THUMPD1-202ENST00000396083 CA12O43570 354 aa11.92□□□□□ -0.5
THUMPD1-202ENST00000396083 CTCFP49711 727 aaPredicted RBP11.92□□□□□ -0.5
THUMPD1-202ENST00000396083 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
THUMPD1-202ENST00000396083 STAG1Q8WVM7 1258 aa11.92□□□□□ -0.5
THUMPD1-202ENST00000396083 ASCC2Q9H1I8 757 aaPredicted RBP11.92□□□□□ -0.5
THUMPD1-202ENST00000396083 RPAP3Q9H6T3 665 aaPredicted RBP11.92□□□□□ -0.5
THUMPD1-202ENST00000396083 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms