RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SUPT20HQ8NEM7 779 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 AIDAQ96BJ3 306 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 MTMR8Q96EF0 704 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 CRNKL1Q9BZJ0 848 aaKnown RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 DEFB129Q9H1M3 183 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 DDX19AQ9NUU7 478 aaKnown RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 KCNG1Q9UIX4 513 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 IQSEC3Q9UPP2 1182 aaPredicted RBP6.18□□□□□ -1.42
VPS41-203ENST00000395969 CHMP3Q9Y3E7 222 aa6.18□□□□□ -1.42
VPS41-203ENST00000395969 MBD4O95243 580 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 KRT85P78386 507 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 FKBP4Q02790 459 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS41-203ENST00000395969 TROAPQ12815 778 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 SOGA3Q5TF21 947 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 NT5DC1Q5TFE4 455 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.17□□□□□ -1.42
VPS41-203ENST00000395969 C16orf45Q96MC5 204 aaPredicted RBP6.17□□□□□ -1.42
VPS41-203ENST00000395969 ZDHHC15Q96MV8 337 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 EFCC1Q9HA90 598 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 SWAP70Q9UH65 585 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 GGA1Q9UJY5 639 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 SBF1O95248 1867 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 PTPDC1A2A3K4 754 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 PPEF1O14829 653 aaPredicted RBP6.17□□□□□ -1.42
VPS41-203ENST00000395969 PLA2G6O60733 806 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 CLSTN1O94985 981 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 BMP15O95972 392 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 GHRHRQ02643 423 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 PPP1R18Q6NYC8 613 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 FBXO38Q6PIJ6 1188 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 PLA2G4DQ86XP0 818 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 SPC24Q8NBT2 197 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 ESR2Q92731 530 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 MKL1Q969V6 931 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 ZNF396Q96N95 335 aaPredicted RBP6.17□□□□□ -1.42
VPS41-203ENST00000395969 ZNF446Q9NWS9 450 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 ZSWIM5Q9P217 1185 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 CNPY2Q9Y2B0 182 aa6.17□□□□□ -1.42
VPS41-203ENST00000395969 LOC102724159A0A0B4J2E5 919 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 HNRNPH2P55795 449 aaKnown RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 GRM4Q14833 912 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 PTPAQ15257 358 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 PWP2Q15269 919 aaKnown RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 STRIP1Q5VSL9 837 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 ADALQ6DHV7 355 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CNNM4Q6P4Q7 775 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 PI16Q6UXB8 463 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 MFSD6Q6ZSS7 791 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CCDC83Q8IWF9 413 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 FAM200AQ8TCP9 573 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 LEO1Q8WVC0 666 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 SPZ1Q9BXG8 430 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 ZNF287Q9HBT7 754 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 SERPINA10Q9UK55 444 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 COL4A5P29400 1685 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 TBC1D12O60347 775 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 SLC3A2P08195 630 aaKnown RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 CDC25BP30305 580 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 KIF23Q02241 960 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 RAD51AP2Q09MP3 1159 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 SLC15A2Q16348 729 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 MUM1L1Q5H9M0 696 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 LARP1BQ659C4 914 aaKnown RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 NYAP1Q6ZVC0 841 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CRACR2BQ8N4Y2 399 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 GPATCH11Q8N954 259 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 SPATA20Q8TB22 786 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 KCNG4Q8TDN1 519 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 BRF1Q92994 677 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CCDC97Q96F63 343 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 ERO1AQ96HE7 468 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 ZSCAN10Q96SZ4 725 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 EYA3Q99504 573 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 PHF20Q9BVI0 1012 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 DEXIO95424 95 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 BAG3O95817 575 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CHGBP05060 677 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CCDC192P0DO97 292 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 H2AFXP16104 143 aaPredicted RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 TGFB2P61812 414 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 LRMPQ12912 555 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 TRDNQ13061 729 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 SART3Q15020 963 aaKnown RBP6.16□□□□□ -1.42
VPS41-203ENST00000395969 NPY5RQ15761 445 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CEP135Q66GS9 1140 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 SMYD5Q6GMV2 418 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 SARM1Q6SZW1 724 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CDC37L1Q7L3B6 337 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CCDC186Q7Z3E2 898 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 NEDD1Q8NHV4 660 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CNKSR1Q969H4 720 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 GMLQ99445 158 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 NAPBQ9H115 298 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 CLSTN2Q9H4D0 955 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 ST7Q9NRC1 585 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 POLLQ9UGP5 575 aa6.16□□□□□ -1.42
VPS41-203ENST00000395969 MMP1P03956 469 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 CYP7A1P22680 504 aa6.15□□□□□ -1.42
VPS41-203ENST00000395969 GNAQP50148 359 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms