RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 SEPT4O43236 478 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 CLTBP09497 229 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 PBX2P40425 430 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 MECOMQ03112 1051 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 OLFML2BQ68BL8 750 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 CCDC102BQ68D86 513 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 CCAR1Q8IX12 1150 aaKnown RBP17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 PRDM12Q9H4Q4 367 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 PHF24Q9UPV7 400 aa17.05■□□□□ 0.32
VCPKMT-201ENST00000395859 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 ADORA1P30542 326 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 CCNA1P78396 465 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 FPGSQ05932 587 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 EPHX3Q9H6B9 360 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 GINM1Q9NU53 330 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 HCN4Q9Y3Q4 1203 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 WDFY4Q6ZS81 3184 aa17.04■□□□□ 0.32
VCPKMT-201ENST00000395859 CIAO1O76071 339 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 ANO1Q5XXA6 986 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 C16orf59Q7L2K0 433 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 FERMT2Q96AC1 680 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 C11orf16Q9NQ32 467 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 BTBD7Q9P203 1132 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 ABCF2Q9UG63 623 aa17.03■□□□□ 0.32
VCPKMT-201ENST00000395859 NSUN4Q96CB9 384 aaKnown RBP17.02■□□□□ 0.32
VCPKMT-201ENST00000395859 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.32
VCPKMT-201ENST00000395859 PI4KBQ9UBF8 816 aa17.02■□□□□ 0.32
VCPKMT-201ENST00000395859 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 GRXCR1A8MXD5 290 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 RAG1P15918 1043 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 FAAP100Q0VG06 881 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 DDX10Q13206 875 aaKnown RBP17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 CCDC85BQ15834 202 aaPredicted RBP17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 SPTY2D1Q68D10 685 aaPredicted RBP17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 ANKRD33Q7Z3H0 272 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 ZBTB21Q9ULJ3 1066 aa17.01■□□□□ 0.31
VCPKMT-201ENST00000395859 WDR63Q8IWG1 891 aa17■□□□□ 0.31
VCPKMT-201ENST00000395859 SNX27Q96L92 541 aa17■□□□□ 0.31
VCPKMT-201ENST00000395859 TOX2Q96NM4 488 aa17■□□□□ 0.31
VCPKMT-201ENST00000395859 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L15C9J2P7 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L13C9JLJ4 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L11C9JVI0 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L18D6R9N7 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L22D6RA61 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L17D6RBQ6 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L19D6RCP7 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L20D6RJB6 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 USP17L24Q0WX57 530 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 TMEM240Q5SV17 173 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 DHX36Q9H2U1 1008 aaKnown RBP16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 CWC22Q9HCG8 908 aaKnown RBP16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 CDK5RAP2Q96SN8 1893 aa16.99■□□□□ 0.31
VCPKMT-201ENST00000395859 SPDYE16A6NNV3 312 aaPredicted RBP16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 GPR37L1O60883 481 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 COBLO75128 1261 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 GDF11O95390 407 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 ADORA2AP29274 412 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 TFF2Q03403 129 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 TMEM31Q5JXX7 168 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 PRAMEF19Q5SWL8 479 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 TMEM39AQ9NV64 488 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 IVNS1ABPQ9Y6Y0 642 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
VCPKMT-201ENST00000395859 TIMP1P01033 207 aa16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 KCNQ1P51787 676 aa16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 WDR78Q5VTH9 848 aa16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 ALYREFQ86V81 257 aaKnown RBP16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 FOXP4Q8IVH2 680 aaPredicted RBP16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 TEX11Q8IYF3 940 aa16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 ROBO3Q96MS0 1386 aa16.97■□□□□ 0.31
VCPKMT-201ENST00000395859 A0A0G2JMZ2 1700 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 A0A1W2PQY0 241 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 STRNO43815 780 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 PQBP1O60828 265 aaKnown RBP16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 LDHCP07864 332 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 IL15P40933 162 aaPredicted RBP16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 SLC44A5Q8NCS7 719 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 SH3RF3Q8TEJ3 882 aaPredicted RBP16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 KHSRPQ92945 711 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■■□□□ 11.9
VCPKMT-201ENST00000395859 SIL1Q9H173 461 aa16.96■□□□□ 0.31
VCPKMT-201ENST00000395859 PRRC2BQ5JSZ5 2229 aaKnown RBP16.96■□□□□ 0.3
VCPKMT-201ENST00000395859 GBF1Q92538 1859 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 ERC2O15083 957 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 VCAM1P19320 739 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 TIMM10P62072 90 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 GSTO1P78417 241 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 DPP9Q86TI2 863 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms